Variant report

Variant	rs7635666
Chromosome Location	chr3:50701577-50701578
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:50696283..50697970-chr3:50700544..50702875,2	K562	blood:

Extended variants
information (count: 121 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:121)

rs_ID	r²[population]
rs1013233	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11130255	0.82[EUR][1000 genomes]
rs11710858	0.82[EUR][1000 genomes]
rs11712367	0.88[ASN][1000 genomes]
rs11716398	1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs129310	0.85[AMR][1000 genomes]
rs13089719	0.82[EUR][1000 genomes]
rs13094785	0.83[EUR][1000 genomes]
rs1379873	0.81[EUR][1000 genomes]
rs1379874	0.81[EUR][1000 genomes]
rs1379875	0.81[EUR][1000 genomes]
rs1385025	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1458387	0.81[EUR][1000 genomes]
rs1531271	0.81[EUR][1000 genomes]
rs1563684	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1598927	0.82[EUR][1000 genomes]
rs1598928	0.81[EUR][1000 genomes]
rs175634	0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs1824281	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1841067	0.81[EUR][1000 genomes]
rs1966921	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1971976	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs201193	0.80[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2085582	0.81[EUR][1000 genomes]
rs2085584	0.81[EUR][1000 genomes]
rs2085585	0.81[EUR][1000 genomes]
rs2085586	0.81[EUR][1000 genomes]
rs2086827	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2125369	0.81[EUR][1000 genomes]
rs2168865	0.81[EUR][1000 genomes]
rs2219431	0.81[EUR][1000 genomes]
rs2219432	0.81[EUR][1000 genomes]
rs2219433	0.82[EUR][1000 genomes]
rs2232248	0.80[AMR][1000 genomes]
rs2269505	0.85[AMR][1000 genomes]
rs2355323	0.87[AMR][1000 genomes]
rs2355341	0.81[EUR][1000 genomes]
rs2355702	0.82[EUR][1000 genomes]
rs2608990	0.81[EUR][1000 genomes]
rs2609016	0.81[EUR][1000 genomes]
rs2609018	0.81[EUR][1000 genomes]
rs2609019	0.81[EUR][1000 genomes]
rs2609028	0.81[EUR][1000 genomes]
rs2609035	0.81[EUR][1000 genomes]
rs2609036	0.81[EUR][1000 genomes]
rs2675784	0.81[EUR][1000 genomes]
rs2675819	0.81[EUR][1000 genomes]
rs2675821	0.81[EUR][1000 genomes]
rs2675822	0.81[EUR][1000 genomes]
rs2675825	0.81[EUR][1000 genomes]
rs34492910	0.82[EUR][1000 genomes]
rs34773360	0.81[EUR][1000 genomes]
rs34848480	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34866096	0.82[EUR][1000 genomes]
rs35170043	0.81[EUR][1000 genomes]
rs35193996	0.81[EUR][1000 genomes]
rs35429015	0.82[EUR][1000 genomes]
rs35531616	0.82[EUR][1000 genomes]
rs35566897	0.82[EUR][1000 genomes]
rs36011798	0.82[EUR][1000 genomes]
rs36057916	0.81[EUR][1000 genomes]
rs375544	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3792325	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3792328	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3804627	0.82[AMR][1000 genomes]
rs3804632	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3943212	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs396302	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs399971	0.85[AMR][1000 genomes]
rs414171	0.92[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs417592	0.84[AMR][1000 genomes]
rs441516	0.87[AMR][1000 genomes]
rs443030	0.85[AMR][1000 genomes]
rs443436	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs448028	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4530518	0.82[EUR][1000 genomes]
rs453570	0.87[AMR][1000 genomes]
rs61549968	0.82[EUR][1000 genomes]
rs616589	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6446210	0.83[EUR][1000 genomes]
rs6446212	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6446213	0.80[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs66472954	0.81[EUR][1000 genomes]
rs66684483	0.81[EUR][1000 genomes]
rs67211895	0.81[EUR][1000 genomes]
rs6763990	0.82[EUR][1000 genomes]
rs67672341	0.81[EUR][1000 genomes]
rs6770954	0.84[EUR][1000 genomes]
rs6776224	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6778680	0.80[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6779819	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6796769	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs68191286	0.82[EUR][1000 genomes]
rs695170	0.87[AMR][1000 genomes]
rs71326944	0.82[EUR][1000 genomes]
rs71326945	0.84[EUR][1000 genomes]
rs71329017	0.81[EUR][1000 genomes]
rs728901	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73072418	0.82[EUR][1000 genomes]
rs73072438	0.81[EUR][1000 genomes]
rs73072442	0.82[EUR][1000 genomes]
rs751851	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7611428	0.82[EUR][1000 genomes]
rs7615703	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7642158	0.82[EUR][1000 genomes]
rs7645212	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7646236	0.87[AMR][1000 genomes]
rs808149	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs809454	0.85[AMR][1000 genomes]
rs813243	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs900735	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs936405	0.81[EUR][1000 genomes]
rs936406	0.81[EUR][1000 genomes]
rs9682401	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9820606	0.86[ASN][1000 genomes]
rs9824444	0.83[ASN][1000 genomes]
rs9824522	0.88[ASN][1000 genomes]
rs9825535	0.87[ASN][1000 genomes]
rs9826757	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9831288	0.84[ASN][1000 genomes]
rs9867489	0.88[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:50685800-50703800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr3:50687000-50712000	Weak transcription	Right Atrium	heart
3	chr3:50687600-50702400	Weak transcription	Spleen	Spleen
4	chr3:50688200-50702600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr3:50688800-50702600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr3:50690200-50702200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr3:50696200-50702400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr3:50696400-50702800	Weak transcription	HSMM	muscle
9	chr3:50699800-50703600	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr3:50700800-50702400	Enhancers	Placenta	Placenta
11	chr3:50701000-50702400	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr3:50701000-50703200	Enhancers	Monocytes-CD14+_RO01746	blood
13	chr3:50701000-50703800	Weak transcription	Hela-S3	cervix
14	chr3:50701000-50704400	Weak transcription	NHDF-Ad	bronchial

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