Variant report

Variant	rs9820606
Chromosome Location	chr3:50771819-50771820
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs1013233	0.86[ASN][1000 genomes]
rs10510754	0.84[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs11712367	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11716398	0.87[ASN][1000 genomes]
rs11917538	0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11928733	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs12639243	0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs1385025	0.86[ASN][1000 genomes]
rs1458385	0.84[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs1563684	0.87[ASN][1000 genomes]
rs1598926	0.95[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs1824281	0.87[ASN][1000 genomes]
rs1966921	0.87[ASN][1000 genomes]
rs1971976	0.89[ASN][1000 genomes]
rs2086827	0.87[ASN][1000 genomes]
rs2355350	0.99[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2355697	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2355700	0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs34848480	0.89[ASN][1000 genomes]
rs3792328	0.81[ASN][1000 genomes]
rs3804632	0.81[ASN][1000 genomes]
rs3943212	0.88[ASN][1000 genomes]
rs396302	0.81[ASN][1000 genomes]
rs4346541	0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4346542	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs443436	0.82[ASN][1000 genomes]
rs4447760	0.82[AMR][1000 genomes]
rs448028	0.82[ASN][1000 genomes]
rs4485709	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs6446212	0.87[ASN][1000 genomes]
rs6446213	0.87[ASN][1000 genomes]
rs6446220	0.94[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs6446222	0.95[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs6776224	0.87[ASN][1000 genomes]
rs6778680	0.87[ASN][1000 genomes]
rs6779819	0.87[ASN][1000 genomes]
rs6795573	0.82[AMR][1000 genomes]
rs6796769	0.85[ASN][1000 genomes]
rs728901	0.85[ASN][1000 genomes]
rs7433217	0.82[AMR][1000 genomes]
rs751851	0.89[ASN][1000 genomes]
rs7615703	0.87[ASN][1000 genomes]
rs7616183	0.81[AMR][1000 genomes]
rs7621650	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs7635666	0.86[ASN][1000 genomes]
rs7638082	0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7639301	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs7639828	0.95[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs7645212	0.85[ASN][1000 genomes]
rs808149	0.82[ASN][1000 genomes]
rs900735	0.86[ASN][1000 genomes]
rs9682401	0.82[ASN][1000 genomes]
rs9824444	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9824522	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9825535	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9826757	0.87[ASN][1000 genomes]
rs9831288	0.94[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs9859692	0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs9867489	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9869945	0.95[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs9875961	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:50763800-50772800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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