Variant report

Variant	rs7645212
Chromosome Location	chr3:50734849-50734850
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 168 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:168)

rs_ID	r²[population]
rs1013233	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11130255	0.87[EUR][1000 genomes]
rs11710858	0.87[EUR][1000 genomes]
rs11712367	0.85[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs11716398	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs13072085	0.82[EUR][1000 genomes]
rs13075344	0.85[EUR][1000 genomes]
rs13084771	0.83[EUR][1000 genomes]
rs13085096	0.85[EUR][1000 genomes]
rs13089719	0.87[EUR][1000 genomes]
rs13094785	0.88[EUR][1000 genomes]
rs13095920	0.80[EUR][1000 genomes]
rs13096264	0.83[EUR][1000 genomes]
rs13096772	0.83[EUR][1000 genomes]
rs1379873	0.84[EUR][1000 genomes]
rs1379874	0.84[EUR][1000 genomes]
rs1379875	0.84[EUR][1000 genomes]
rs1385025	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1458386	0.83[EUR][1000 genomes]
rs1458387	0.86[EUR][1000 genomes]
rs1463496	0.81[EUR][1000 genomes]
rs1463497	0.81[EUR][1000 genomes]
rs1531271	0.84[EUR][1000 genomes]
rs1563683	0.81[EUR][1000 genomes]
rs1563684	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1598927	0.85[EUR][1000 genomes]
rs1598928	0.84[EUR][1000 genomes]
rs175634	0.81[AMR][1000 genomes]
rs17660179	0.80[EUR][1000 genomes]
rs1824280	0.81[EUR][1000 genomes]
rs1824281	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1841067	0.84[EUR][1000 genomes]
rs1902960	0.81[EUR][1000 genomes]
rs1966921	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1971976	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs201193	0.82[AMR][1000 genomes]
rs2085582	0.84[EUR][1000 genomes]
rs2085584	0.84[EUR][1000 genomes]
rs2085585	0.84[EUR][1000 genomes]
rs2085586	0.84[EUR][1000 genomes]
rs2086827	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2125366	0.81[EUR][1000 genomes]
rs2125369	0.86[EUR][1000 genomes]
rs2168865	0.84[EUR][1000 genomes]
rs2168866	0.83[EUR][1000 genomes]
rs2199050	0.80[EUR][1000 genomes]
rs2219431	0.84[EUR][1000 genomes]
rs2219432	0.84[EUR][1000 genomes]
rs2219433	0.85[EUR][1000 genomes]
rs2262810	0.80[EUR][1000 genomes]
rs2355323	0.80[AMR][1000 genomes]
rs2355341	0.86[EUR][1000 genomes]
rs2355702	0.85[EUR][1000 genomes]
rs2608989	0.80[EUR][1000 genomes]
rs2608990	0.84[EUR][1000 genomes]
rs2608999	0.80[EUR][1000 genomes]
rs2609001	0.80[EUR][1000 genomes]
rs2609005	0.80[EUR][1000 genomes]
rs2609006	0.80[EUR][1000 genomes]
rs2609016	0.84[EUR][1000 genomes]
rs2609018	0.84[EUR][1000 genomes]
rs2609019	0.84[EUR][1000 genomes]
rs2609024	0.80[EUR][1000 genomes]
rs2609028	0.84[EUR][1000 genomes]
rs2609035	0.86[EUR][1000 genomes]
rs2609036	0.86[EUR][1000 genomes]
rs2675769	0.80[EUR][1000 genomes]
rs2675771	0.80[EUR][1000 genomes]
rs2675772	0.80[EUR][1000 genomes]
rs2675773	0.80[EUR][1000 genomes]
rs2675774	0.80[EUR][1000 genomes]
rs2675784	0.84[EUR][1000 genomes]
rs2675810	0.80[EUR][1000 genomes]
rs2675812	0.80[EUR][1000 genomes]
rs2675813	0.80[EUR][1000 genomes]
rs2675819	0.84[EUR][1000 genomes]
rs2675821	0.84[EUR][1000 genomes]
rs2675822	0.84[EUR][1000 genomes]
rs2675825	0.84[EUR][1000 genomes]
rs2675827	0.80[EUR][1000 genomes]
rs34048522	0.80[EUR][1000 genomes]
rs34266990	0.85[EUR][1000 genomes]
rs34390947	0.85[EUR][1000 genomes]
rs34492910	0.87[EUR][1000 genomes]
rs34632971	0.83[EUR][1000 genomes]
rs34773360	0.86[EUR][1000 genomes]
rs34846525	0.83[EUR][1000 genomes]
rs34848480	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34866096	0.87[EUR][1000 genomes]
rs35140911	0.80[EUR][1000 genomes]
rs35170043	0.86[EUR][1000 genomes]
rs35193996	0.84[EUR][1000 genomes]
rs35429015	0.87[EUR][1000 genomes]
rs35531616	0.87[EUR][1000 genomes]
rs35566897	0.87[EUR][1000 genomes]
rs36011798	0.87[EUR][1000 genomes]
rs36057916	0.84[EUR][1000 genomes]
rs375544	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3792325	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3792328	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3804628	0.83[EUR][1000 genomes]
rs3804632	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3943212	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs396302	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs414171	0.85[AMR][1000 genomes]
rs441516	0.80[AMR][1000 genomes]
rs4429624	0.81[EUR][1000 genomes]
rs443436	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs448028	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4530518	0.85[EUR][1000 genomes]
rs453570	0.80[AMR][1000 genomes]
rs4688702	0.81[EUR][1000 genomes]
rs4688703	0.81[EUR][1000 genomes]
rs5000953	0.81[EUR][1000 genomes]
rs61549968	0.87[EUR][1000 genomes]
rs616589	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6446210	0.88[EUR][1000 genomes]
rs6446212	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6446213	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6446215	0.81[EUR][1000 genomes]
rs66472954	0.84[EUR][1000 genomes]
rs66684483	0.84[EUR][1000 genomes]
rs66867590	0.83[EUR][1000 genomes]
rs67211895	0.84[EUR][1000 genomes]
rs67410403	0.80[EUR][1000 genomes]
rs6763990	0.83[EUR][1000 genomes]
rs67672341	0.84[EUR][1000 genomes]
rs6770954	0.83[EUR][1000 genomes]
rs6775012	0.81[EUR][1000 genomes]
rs6776224	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6778680	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6779819	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6791880	0.83[EUR][1000 genomes]
rs6796769	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs68191286	0.87[EUR][1000 genomes]
rs695170	0.80[AMR][1000 genomes]
rs71326944	0.87[EUR][1000 genomes]
rs71326945	0.85[EUR][1000 genomes]
rs71329007	0.80[EUR][1000 genomes]
rs71329014	0.80[EUR][1000 genomes]
rs71329017	0.84[EUR][1000 genomes]
rs728901	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73072418	0.87[EUR][1000 genomes]
rs73072438	0.86[EUR][1000 genomes]
rs73072442	0.87[EUR][1000 genomes]
rs751851	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7611428	0.87[EUR][1000 genomes]
rs7615703	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7629253	0.81[EUR][1000 genomes]
rs7635666	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7642158	0.85[EUR][1000 genomes]
rs7646236	0.80[AMR][1000 genomes]
rs7650574	0.81[EUR][1000 genomes]
rs7652715	0.82[EUR][1000 genomes]
rs808149	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs813243	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs900735	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs936405	0.86[EUR][1000 genomes]
rs936406	0.86[EUR][1000 genomes]
rs9682401	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9820606	0.85[ASN][1000 genomes]
rs9824444	0.82[ASN][1000 genomes]
rs9824522	0.87[ASN][1000 genomes]
rs9825535	0.87[ASN][1000 genomes]
rs9826757	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9831288	0.82[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs9839684	0.81[EUR][1000 genomes]
rs9867489	0.85[AFR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:50723000-50736800	Weak transcription	Brain Hippocampus Middle	brain

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