Variant report

Variant rs59949730
Chromosome Location chr3:50629340-50629341
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50608200-50637400 Weak transcription Fetal Kidney kidney
2 chr3:50622400-50629800 Weak transcription Fetal Lung lung
3 chr3:50623000-50636600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr3:50623200-50633800 Enhancers Fetal Thymus thymus
5 chr3:50624400-50629600 Weak transcription Fetal Stomach stomach
6 chr3:50625200-50630600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr3:50626400-50629600 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr3:50626800-50629400 Enhancers HepG2 liver
9 chr3:50626800-50632400 Enhancers Liver Liver
10 chr3:50627200-50629800 Weak transcription Fetal Intestine Small intestine
11 chr3:50627800-50630000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
12 chr3:50628000-50629400 Enhancers Psoas Muscle Psoas
13 chr3:50628000-50629400 Enhancers Right Atrium heart
14 chr3:50628000-50629400 Enhancers Right Ventricle heart
15 chr3:50628000-50630000 Enhancers Osteobl bone
16 chr3:50628000-50630400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr3:50628000-50630600 Enhancers Stomach Mucosa stomach
18 chr3:50628000-50630600 Enhancers Spleen Spleen
19 chr3:50628000-50630800 Enhancers Esophagus oesophagus
20 chr3:50628000-50630800 Enhancers Fetal Muscle Trunk muscle
21 chr3:50628000-50630800 Enhancers Gastric stomach
22 chr3:50628000-50630800 Enhancers Pancreas Pancrea
23 chr3:50628000-50630800 Enhancers Skeletal Muscle Female skeletal muscle
24 chr3:50628000-50630800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
25 chr3:50628000-50631000 Enhancers Fetal Muscle Leg muscle
26 chr3:50628000-50631200 Enhancers Placenta Placenta
27 chr3:50628000-50631200 Enhancers Left Ventricle heart
28 chr3:50628000-50631200 Enhancers Lung lung
29 chr3:50628200-50629400 Enhancers Colonic Mucosa Colon
30 chr3:50628200-50630400 Enhancers Small Intestine intestine
31 chr3:50628200-50632400 Enhancers Fetal Heart heart
32 chr3:50628400-50629400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr3:50628400-50630600 Enhancers Primary B cells from peripheral blood blood
34 chr3:50628400-50630800 Enhancers Primary Natural Killer cells fromperipheralblood blood
35 chr3:50628400-50632000 Enhancers Primary monocytes fromperipheralblood blood
36 chr3:50628400-50633800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
37 chr3:50628600-50629400 Enhancers Rectal Mucosa Donor 31 rectum
38 chr3:50628600-50629800 Enhancers Colon Smooth Muscle Colon
39 chr3:50628600-50630600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr3:50628600-50630600 Enhancers Stomach Smooth Muscle stomach
41 chr3:50628600-50630600 Enhancers NHEK skin
42 chr3:50628600-50630800 Enhancers Duodenum Mucosa Duodenum
43 chr3:50628600-50631000 Enhancers Primary hematopoietic stem cells blood
44 chr3:50628600-50633600 Enhancers Primary T helper cells fromperipheralblood blood
45 chr3:50628600-50635600 Weak transcription Rectal Smooth Muscle rectum
46 chr3:50628600-50638200 Weak transcription Placenta Amnion Placenta Amnion
47 chr3:50628800-50629400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr3:50628800-50629400 Weak transcription Brain Inferior Temporal Lobe brain
49 chr3:50628800-50629400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr3:50628800-50629600 Weak transcription Duodenum Smooth Muscle Duodenum

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