Variant report

Variant rs2124069
Chromosome Location chr5:43008710-43008711
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43007000-43009800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr5:43007200-43008800 Flanking Active TSS Primary T cells fromperipheralblood blood
3 chr5:43007200-43008800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr5:43007200-43008800 Flanking Active TSS Adipose Nuclei Adipose
5 chr5:43007200-43008800 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
6 chr5:43007200-43008800 Flanking Active TSS Fetal Thymus thymus
7 chr5:43007200-43009200 Active TSS H9 Cell Line embryonic stem cell
8 chr5:43007200-43009400 Bivalent/Poised TSS Brain Hippocampus Middle brain
9 chr5:43007200-43009600 Active TSS HSMMtube muscle
10 chr5:43007200-43009800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr5:43007200-43010000 Bivalent/Poised TSS Brain Anterior Caudate brain
12 chr5:43007200-43010000 Bivalent/Poised TSS Brain Cingulate Gyrus brain
13 chr5:43007200-43010200 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
14 chr5:43007200-43010200 Bivalent/Poised TSS Left Ventricle heart
15 chr5:43007200-43010400 Bivalent/Poised TSS Rectal Smooth Muscle rectum
16 chr5:43007200-43010800 Active TSS Rectal Mucosa Donor 29 rectum
17 chr5:43007400-43008800 Active TSS HUES6 Cell Line embryonic stem cell
18 chr5:43007400-43008800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
19 chr5:43007400-43008800 Flanking Active TSS Primary B cells from peripheral blood blood
20 chr5:43007400-43008800 Flanking Active TSS Primary hematopoietic stem cells blood
21 chr5:43007400-43008800 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
22 chr5:43007400-43008800 Flanking Bivalent TSS/Enh Fetal Lung lung
23 chr5:43007400-43008800 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
24 chr5:43007400-43008800 Flanking Active TSS NHEK skin
25 chr5:43007400-43009000 Active TSS ES-WA7 Cell Line embryonic stem cell
26 chr5:43007400-43009000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr5:43007400-43009000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr5:43007400-43009000 Active TSS iPS-18 Cell Line embryonic stem cell
29 chr5:43007400-43009000 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
30 chr5:43007400-43009000 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
31 chr5:43007400-43009200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
32 chr5:43007400-43009200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
33 chr5:43007400-43009400 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr5:43007400-43009400 Active TSS Aorta Aorta
35 chr5:43007400-43009600 Bivalent/Poised TSS Fetal Kidney kidney
36 chr5:43007400-43009800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr5:43007400-43009800 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
38 chr5:43007400-43009800 Bivalent/Poised TSS Brain Angular Gyrus brain
39 chr5:43007400-43009800 Active TSS Ovary ovary
40 chr5:43007400-43010000 Bivalent/Poised TSS Liver Liver
41 chr5:43007400-43010000 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
42 chr5:43007400-43010000 Bivalent/Poised TSS Brain Substantia Nigra brain
43 chr5:43007400-43010000 Active TSS Esophagus oesophagus
44 chr5:43007400-43010200 Bivalent/Poised TSS Colon Smooth Muscle Colon
45 chr5:43007400-43010400 Active TSS Sigmoid Colon Sigmoid Colon
46 chr5:43007400-43010600 Bivalent/Poised TSS Psoas Muscle Psoas
47 chr5:43007400-43010800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
48 chr5:43007600-43008800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr5:43007600-43008800 Active TSS HUES48 Cell Line embryonic stem cell
50 chr5:43007600-43008800 Active TSS ES-UCSF4 Cell Line embryonic stem cell

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