Variant report

Variant rs2548356
Chromosome Location chr5:42997024-42997025
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:42995000-43000000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:42995000-43000400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr5:42995600-42999600 Weak transcription NHEK skin
4 chr5:42995600-42999800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr5:42995600-43000000 Weak transcription HMEC breast
6 chr5:42995800-42998800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr5:42995800-43000000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr5:42995800-43000000 Weak transcription K562 blood
9 chr5:42995800-43000200 Weak transcription Muscle Satellite Cultured Cells --
10 chr5:42995800-43000200 Weak transcription Placenta Placenta
11 chr5:42996000-42997200 Enhancers Primary T helper naive cells from peripheral blood blood
12 chr5:42996000-42997200 Enhancers Primary T helper cells PMA-I stimulated --
13 chr5:42996000-42997200 Enhancers Primary T killer naive cells fromperipheralblood blood
14 chr5:42996000-42997400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr5:42996000-42997400 Enhancers Primary T killer memory cells from peripheral blood blood
16 chr5:42996000-42999200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr5:42996000-42999200 Weak transcription Primary B cells from cord blood blood
18 chr5:42996000-42999800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr5:42996000-43000000 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr5:42996000-43000200 Weak transcription Thymus Thymus
21 chr5:42996000-43000800 Weak transcription Spleen Spleen
22 chr5:42996200-43000000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr5:42996200-43000000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr5:42996400-42997200 Enhancers Primary T helper cells fromperipheralblood blood
25 chr5:42996400-42999800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr5:42996600-43000000 Weak transcription HepG2 liver
27 chr5:42996600-43000200 Weak transcription Osteobl bone
28 chr5:42996800-42997800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
29 chr5:42996800-42999200 Weak transcription A549 lung
30 chr5:42996800-42999600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr5:42996800-42999600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr5:42996800-42999800 Weak transcription NHDF-Ad bronchial
33 chr5:42996800-43000000 Weak transcription NHLF lung
34 chr5:42996800-43000200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr5:42997000-42997800 Genic enhancers Dnd41 blood
36 chr5:42997000-43000000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr5:42997000-43000000 Weak transcription HUVEC blood vessel
38 chr5:42997000-43000200 Weak transcription Primary T cells fromperipheralblood blood
39 chr5:42997000-43000400 Weak transcription Primary T helper naive cells fromperipheralblood blood

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