The 2.0 version of rSNPBase

Variant report

Variant rs2142507
Chromosome Location chr1:175151124-175151125
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175129200-175159600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:175130200-175152600 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr1:175135000-175152600 Weak transcription Aorta Aorta
4 chr1:175135000-175158400 Weak transcription Rectal Smooth Muscle rectum
5 chr1:175136000-175151600 Weak transcription Fetal Stomach stomach
6 chr1:175136000-175157600 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr1:175141000-175160200 Weak transcription HUVEC blood vessel
8 chr1:175141400-175158400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr1:175143000-175160800 Weak transcription Fetal Muscle Trunk muscle
10 chr1:175143600-175158000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:175145800-175152600 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr1:175146000-175157800 Genic enhancers Primary B cells from peripheral blood blood
13 chr1:175146200-175159400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr1:175146200-175159800 Weak transcription Stomach Smooth Muscle stomach
15 chr1:175146600-175155600 Weak transcription Ovary ovary
16 chr1:175146800-175160400 Weak transcription Fetal Intestine Large intestine
17 chr1:175147000-175153800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:175147000-175155600 Weak transcription Fetal Muscle Leg muscle
19 chr1:175147000-175156200 Weak transcription Duodenum Mucosa Duodenum
20 chr1:175147200-175151400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:175147200-175155600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:175147600-175160400 Weak transcription Colonic Mucosa Colon
23 chr1:175147800-175151400 Weak transcription Liver Liver
24 chr1:175147800-175151800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr1:175148000-175151600 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr1:175148000-175151800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:175148000-175153400 Weak transcription Primary hematopoietic stem cells blood
28 chr1:175148200-175151600 Enhancers Primary T helper cells PMA-I stimulated --
29 chr1:175148200-175157400 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr1:175148200-175157600 Enhancers Primary T killer memory cells from peripheral blood blood
31 chr1:175148200-175157800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr1:175148400-175159200 Weak transcription Placenta Amnion Placenta Amnion
33 chr1:175148600-175151600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:175148600-175152000 Weak transcription Gastric stomach
35 chr1:175148600-175152200 Weak transcription Fetal Intestine Small intestine
36 chr1:175148600-175154800 Genic enhancers Primary B cells from cord blood blood
37 chr1:175148800-175151800 Weak transcription Primary monocytes fromperipheralblood blood
38 chr1:175148800-175158000 Enhancers Primary T killer naive cells fromperipheralblood blood
39 chr1:175149200-175151200 Weak transcription Primary T cells from cord blood blood
40 chr1:175149200-175151400 Enhancers Spleen Spleen
41 chr1:175149400-175151600 Weak transcription Right Atrium heart
42 chr1:175149400-175152800 Weak transcription Esophagus oesophagus
43 chr1:175149600-175151200 Weak transcription Adipose Nuclei Adipose
44 chr1:175149600-175152200 Enhancers HMEC breast
45 chr1:175149800-175151200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr1:175149800-175151400 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr1:175149800-175151400 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr1:175149800-175151800 Weak transcription Right Ventricle heart
49 chr1:175149800-175153600 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr1:175149800-175153600 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015