The 2.0 version of rSNPBase

Variant report

Variant rs4390138
Chromosome Location chr1:175125840-175125841
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175110200-175127400 Weak transcription Left Ventricle heart
2 chr1:175120000-175139400 Weak transcription Colon Smooth Muscle Colon
3 chr1:175120200-175127600 Weak transcription Stomach Smooth Muscle stomach
4 chr1:175121400-175127600 Weak transcription Spleen Spleen
5 chr1:175121600-175127200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr1:175121600-175128400 Weak transcription Ovary ovary
7 chr1:175121600-175130800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:175121800-175131200 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:175122000-175128200 Weak transcription Gastric stomach
10 chr1:175122200-175132800 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr1:175122200-175133400 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr1:175122200-175136600 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr1:175122400-175129400 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr1:175122800-175127200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:175122800-175128200 Weak transcription Aorta Aorta
16 chr1:175123200-175127400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:175123200-175129600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr1:175123600-175127400 Weak transcription Monocytes-CD14+_RO01746 blood
19 chr1:175123800-175129400 Weak transcription Fetal Intestine Small intestine
20 chr1:175124000-175126800 Weak transcription Primary monocytes fromperipheralblood blood
21 chr1:175124000-175129000 Weak transcription Fetal Muscle Trunk muscle
22 chr1:175124000-175140400 Weak transcription Fetal Heart heart
23 chr1:175124200-175129200 Weak transcription Rectal Smooth Muscle rectum
24 chr1:175124400-175127400 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:175124400-175128000 Weak transcription Primary hematopoietic stem cells blood
26 chr1:175124400-175128200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:175124400-175128200 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr1:175124400-175128400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:175124400-175128400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:175124400-175138200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:175124600-175127200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr1:175124600-175127200 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:175124600-175128400 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr1:175124600-175134600 Weak transcription Small Intestine intestine
35 chr1:175124800-175126400 Weak transcription HMEC breast
36 chr1:175124800-175127600 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr1:175124800-175128200 Weak transcription Primary T cells from cord blood blood
38 chr1:175124800-175128800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr1:175125000-175127000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr1:175125000-175127000 Weak transcription Duodenum Mucosa Duodenum
41 chr1:175125000-175127000 Weak transcription Thymus Thymus
42 chr1:175125000-175127400 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr1:175125000-175127400 Weak transcription Fetal Muscle Leg muscle
44 chr1:175125000-175127600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr1:175125000-175127800 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr1:175125000-175128200 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr1:175125000-175128400 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr1:175125000-175128800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:175125000-175128800 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr1:175125000-175129000 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015