The 2.0 version of rSNPBase

Variant report

Variant rs6425324
Chromosome Location chr1:175164505-175164506
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175162200-175166400 Weak transcription Spleen Spleen
2 chr1:175162400-175168000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:175162600-175164600 Weak transcription Primary monocytes fromperipheralblood blood
4 chr1:175162600-175164600 Enhancers GM12878-XiMat blood
5 chr1:175162600-175166400 Weak transcription Primary T cells from cord blood blood
6 chr1:175162600-175166400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr1:175162600-175166600 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr1:175162600-175167800 Enhancers Primary B cells from peripheral blood blood
9 chr1:175162600-175168000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:175162600-175168400 Enhancers HMEC breast
11 chr1:175162600-175169200 Weak transcription Right Atrium heart
12 chr1:175162600-175169400 Weak transcription NHLF lung
13 chr1:175162600-175178000 Weak transcription Psoas Muscle Psoas
14 chr1:175162800-175164600 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr1:175162800-175166200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr1:175162800-175166200 Weak transcription HUVEC blood vessel
17 chr1:175162800-175166400 Weak transcription Primary T cells fromperipheralblood blood
18 chr1:175162800-175166400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr1:175162800-175166400 Weak transcription Thymus Thymus
20 chr1:175162800-175166600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr1:175162800-175166600 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr1:175162800-175166800 Enhancers Primary B cells from cord blood blood
23 chr1:175162800-175168000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:175162800-175169400 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr1:175163000-175166200 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr1:175163000-175166200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr1:175163000-175166400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:175163000-175166400 Weak transcription Adipose Nuclei Adipose
29 chr1:175163000-175166400 Weak transcription Esophagus oesophagus
30 chr1:175163000-175166400 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:175163000-175166600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:175163000-175168000 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr1:175163000-175168800 Weak transcription Fetal Stomach stomach
34 chr1:175163000-175168800 Weak transcription Lung lung
35 chr1:175163000-175173800 Weak transcription Colonic Mucosa Colon
36 chr1:175163200-175166200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:175163200-175166200 Weak transcription Fetal Muscle Leg muscle
38 chr1:175163200-175166200 Weak transcription Placenta Placenta
39 chr1:175163200-175166200 Weak transcription Hela-S3 cervix
40 chr1:175163200-175166400 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr1:175163200-175166400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr1:175163200-175166400 Weak transcription Fetal Thymus thymus
43 chr1:175163200-175168800 Weak transcription Left Ventricle heart
44 chr1:175163200-175169400 Weak transcription Stomach Mucosa stomach
45 chr1:175163200-175169800 Weak transcription Liver Liver
46 chr1:175163200-175170200 Weak transcription Fetal Muscle Trunk muscle
47 chr1:175163600-175173600 Weak transcription Small Intestine intestine
48 chr1:175163800-175165200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr1:175163800-175166200 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr1:175163800-175166200 Weak transcription Primary hematopoietic stem cells short term culture blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015