The 2.0 version of rSNPBase

Variant report

Variant rs7533374
Chromosome Location chr1:175164763-175164764
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175162200-175166400 Weak transcription Spleen Spleen
2 chr1:175162400-175168000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:175162600-175166400 Weak transcription Primary T cells from cord blood blood
4 chr1:175162600-175166400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr1:175162600-175166600 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr1:175162600-175167800 Enhancers Primary B cells from peripheral blood blood
7 chr1:175162600-175168000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:175162600-175168400 Enhancers HMEC breast
9 chr1:175162600-175169200 Weak transcription Right Atrium heart
10 chr1:175162600-175169400 Weak transcription NHLF lung
11 chr1:175162600-175178000 Weak transcription Psoas Muscle Psoas
12 chr1:175162800-175166200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr1:175162800-175166200 Weak transcription HUVEC blood vessel
14 chr1:175162800-175166400 Weak transcription Primary T cells fromperipheralblood blood
15 chr1:175162800-175166400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr1:175162800-175166400 Weak transcription Thymus Thymus
17 chr1:175162800-175166600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr1:175162800-175166600 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr1:175162800-175166800 Enhancers Primary B cells from cord blood blood
20 chr1:175162800-175168000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:175162800-175169400 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr1:175163000-175166200 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr1:175163000-175166200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr1:175163000-175166400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:175163000-175166400 Weak transcription Adipose Nuclei Adipose
26 chr1:175163000-175166400 Weak transcription Esophagus oesophagus
27 chr1:175163000-175166400 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr1:175163000-175166600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr1:175163000-175168000 Enhancers Breast Myoepithelial Primary Cells Breast
30 chr1:175163000-175168800 Weak transcription Fetal Stomach stomach
31 chr1:175163000-175168800 Weak transcription Lung lung
32 chr1:175163000-175173800 Weak transcription Colonic Mucosa Colon
33 chr1:175163200-175166200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:175163200-175166200 Weak transcription Fetal Muscle Leg muscle
35 chr1:175163200-175166200 Weak transcription Placenta Placenta
36 chr1:175163200-175166200 Weak transcription Hela-S3 cervix
37 chr1:175163200-175166400 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr1:175163200-175166400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:175163200-175166400 Weak transcription Fetal Thymus thymus
40 chr1:175163200-175168800 Weak transcription Left Ventricle heart
41 chr1:175163200-175169400 Weak transcription Stomach Mucosa stomach
42 chr1:175163200-175169800 Weak transcription Liver Liver
43 chr1:175163200-175170200 Weak transcription Fetal Muscle Trunk muscle
44 chr1:175163600-175173600 Weak transcription Small Intestine intestine
45 chr1:175163800-175165200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:175163800-175166200 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr1:175163800-175166200 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr1:175163800-175166400 Weak transcription Primary hematopoietic stem cells blood
49 chr1:175163800-175166400 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr1:175164600-175164800 Enhancers Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015