The 2.0 version of rSNPBase

Variant report

Variant rs2172727
Chromosome Location chr1:78016517-78016518
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78000000-78030600 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr1:78000000-78031200 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:78005600-78034800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:78005800-78026200 Weak transcription Left Ventricle heart
5 chr1:78005800-78032400 Weak transcription Psoas Muscle Psoas
6 chr1:78006000-78022400 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr1:78006000-78026200 Weak transcription Fetal Muscle Leg muscle
8 chr1:78006000-78031000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:78006200-78024400 Weak transcription HSMMtube muscle
10 chr1:78006200-78027200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:78006200-78064400 Weak transcription Stomach Mucosa stomach
12 chr1:78007800-78028400 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr1:78009000-78023200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:78010000-78027400 Weak transcription A549 lung
15 chr1:78010800-78017400 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr1:78011800-78021000 Weak transcription HSMM muscle
17 chr1:78012000-78019800 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr1:78012000-78031000 Weak transcription Brain Angular Gyrus brain
19 chr1:78012200-78017000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:78012200-78021000 Weak transcription NHLF lung
21 chr1:78012200-78023000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:78012200-78023800 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr1:78012600-78017200 Weak transcription Primary T cells from cord blood blood
24 chr1:78012600-78022600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr1:78012600-78023000 Weak transcription Osteobl bone
26 chr1:78012600-78031000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:78012800-78023000 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:78014200-78017200 Weak transcription Brain Cingulate Gyrus brain
29 chr1:78014200-78024200 Weak transcription Brain Substantia Nigra brain
30 chr1:78014200-78026000 Weak transcription Brain Anterior Caudate brain
31 chr1:78014400-78017000 Weak transcription Brain Inferior Temporal Lobe brain
32 chr1:78014400-78019200 Weak transcription Fetal Heart heart
33 chr1:78014400-78022600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:78014400-78024200 Weak transcription Brain Hippocampus Middle brain
35 chr1:78014400-78030600 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:78014400-78031800 Weak transcription Right Ventricle heart
37 chr1:78014600-78022600 Weak transcription Muscle Satellite Cultured Cells --
38 chr1:78014600-78023200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:78014600-78024600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:78014600-78027800 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr1:78015800-78024400 Weak transcription Fetal Intestine Small intestine
42 chr1:78016000-78030600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr1:78016400-78021000 Weak transcription NHDF-Ad bronchial

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015