The 2.0 version of rSNPBase

Variant report

Variant rs4949657
Chromosome Location chr1:77991508-77991509
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77980800-77999400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr1:77981800-77998400 Weak transcription Osteobl bone
3 chr1:77981800-77999200 Weak transcription NHLF lung
4 chr1:77981800-77999400 Weak transcription HSMMtube muscle
5 chr1:77982000-77998200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr1:77982000-77998200 Weak transcription Brain Angular Gyrus brain
7 chr1:77982200-77998200 Weak transcription Brain Anterior Caudate brain
8 chr1:77983000-78009200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:77984600-77996400 Strong transcription NHDF-Ad bronchial
10 chr1:77984800-77991600 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr1:77984800-77991600 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr1:77985200-77999400 Weak transcription Brain Substantia Nigra brain
13 chr1:77985400-77999800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:77987200-77992000 Strong transcription HSMM muscle
15 chr1:77987600-77993200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr1:77988400-77999800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:77988600-77999400 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:77988800-77992600 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr1:77989000-77998200 Weak transcription Brain Cingulate Gyrus brain
20 chr1:77990000-77991800 Weak transcription Primary T cells from cord blood blood
21 chr1:77990000-77991800 Weak transcription HUVEC blood vessel
22 chr1:77990400-77998200 Weak transcription Brain Hippocampus Middle brain
23 chr1:77990800-77992000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:77991000-77992200 Strong transcription Muscle Satellite Cultured Cells --
25 chr1:77991200-77992000 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr1:77991200-77992000 Enhancers Primary T helper cells fromperipheralblood blood
27 chr1:77991200-77992200 Enhancers Primary T cells fromperipheralblood blood
28 chr1:77991200-77993200 Enhancers Primary neutrophils fromperipheralblood blood
29 chr1:77991400-77995600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:77991400-77996200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:77991400-77996400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015