Variant report

Variant rs2174739
Chromosome Location chr6:79659170-79659171
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:79648000-79660600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr6:79648000-79681200 Strong transcription Primary T helper cells fromperipheralblood blood
3 chr6:79648800-79714400 Weak transcription Gastric stomach
4 chr6:79649000-79666200 Strong transcription Rectal Mucosa Donor 29 rectum
5 chr6:79649000-79715200 Weak transcription Stomach Mucosa stomach
6 chr6:79649400-79659200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr6:79649600-79681400 Strong transcription Primary T cells fromperipheralblood blood
8 chr6:79650000-79659200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr6:79650400-79659800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr6:79650400-79666200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr6:79653200-79659600 Strong transcription Rectal Smooth Muscle rectum
12 chr6:79653400-79659400 Strong transcription Colonic Mucosa Colon
13 chr6:79654200-79661000 Weak transcription Fetal Heart heart
14 chr6:79655000-79660400 Strong transcription Primary T helper naive cells from peripheral blood blood
15 chr6:79655400-79666000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
16 chr6:79657000-79659800 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr6:79657200-79660200 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr6:79657400-79662800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr6:79658000-79659200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr6:79658000-79659200 ZNF genes & repeats Colon Smooth Muscle Colon
21 chr6:79658000-79659400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
22 chr6:79658000-79659600 ZNF genes & repeats Fetal Brain Female brain
23 chr6:79658000-79659800 ZNF genes & repeats Liver Liver
24 chr6:79658000-79659800 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
25 chr6:79658000-79660000 Strong transcription HSMMtube muscle
26 chr6:79658000-79661600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
27 chr6:79658000-79664600 Strong transcription Skeletal Muscle Male skeletal muscle
28 chr6:79658000-79665400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr6:79658200-79659200 ZNF genes & repeats Adipose Nuclei Adipose
30 chr6:79658200-79659200 ZNF genes & repeats Brain Anterior Caudate brain
31 chr6:79658200-79659200 ZNF genes & repeats Psoas Muscle Psoas
32 chr6:79658200-79659200 ZNF genes & repeats NHLF lung
33 chr6:79658200-79659400 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
34 chr6:79658200-79659400 ZNF genes & repeats Brain Angular Gyrus brain
35 chr6:79658200-79659400 ZNF genes & repeats Brain Hippocampus Middle brain
36 chr6:79658200-79659400 ZNF genes & repeats Brain Inferior Temporal Lobe brain
37 chr6:79658200-79659400 ZNF genes & repeats Brain Dorsolateral Prefrontal Cortex brain
38 chr6:79658200-79659400 ZNF genes & repeats Duodenum Mucosa Duodenum
39 chr6:79658200-79659400 ZNF genes & repeats Esophagus oesophagus
40 chr6:79658200-79659600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr6:79658200-79659600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
42 chr6:79658200-79659600 ZNF genes & repeats Left Ventricle heart
43 chr6:79658200-79659800 ZNF genes & repeats H1 Cell Line embryonic stem cell
44 chr6:79658200-79659800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr6:79658200-79659800 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr6:79658200-79659800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
47 chr6:79658200-79659800 ZNF genes & repeats Primary monocytes fromperipheralblood blood
48 chr6:79658200-79659800 ZNF genes & repeats Primary hematopoietic stem cells blood
49 chr6:79658200-79659800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr6:79658200-79659800 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland

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