Variant report

Variant rs1538235
Chromosome Location chr6:79689450-79689451
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:79648800-79714400 Weak transcription Gastric stomach
2 chr6:79649000-79715200 Weak transcription Stomach Mucosa stomach
3 chr6:79658600-79695000 Weak transcription Pancreas Pancrea
4 chr6:79659200-79702800 Weak transcription Psoas Muscle Psoas
5 chr6:79659400-79702400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr6:79659400-79707000 Weak transcription Esophagus oesophagus
7 chr6:79659600-79704000 Weak transcription Lung lung
8 chr6:79659600-79707000 Weak transcription Spleen Spleen
9 chr6:79659800-79702600 Weak transcription Right Ventricle heart
10 chr6:79659800-79703400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr6:79659800-79704000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr6:79659800-79707000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr6:79664200-79695000 Weak transcription Fetal Stomach stomach
14 chr6:79664200-79698000 Weak transcription Fetal Intestine Small intestine
15 chr6:79664200-79702400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr6:79669800-79707000 Weak transcription Aorta Aorta
17 chr6:79671600-79693200 Weak transcription Thymus Thymus
18 chr6:79672800-79702600 Weak transcription Placenta Amnion Placenta Amnion
19 chr6:79675200-79689800 Weak transcription Rectal Smooth Muscle rectum
20 chr6:79675200-79690000 Weak transcription Brain Inferior Temporal Lobe brain
21 chr6:79675200-79693200 Weak transcription Colonic Mucosa Colon
22 chr6:79675200-79702200 Weak transcription Brain Angular Gyrus brain
23 chr6:79675200-79704600 Weak transcription Small Intestine intestine
24 chr6:79675400-79691800 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr6:79675400-79695000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr6:79675800-79706800 Weak transcription NHEK skin
27 chr6:79676000-79694000 Weak transcription HSMMtube muscle
28 chr6:79676000-79703600 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr6:79676600-79691200 Weak transcription NHLF lung
30 chr6:79676600-79691400 Weak transcription Osteobl bone
31 chr6:79678400-79691400 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr6:79679000-79692000 Weak transcription A549 lung
33 chr6:79679200-79691600 Weak transcription HUVEC blood vessel
34 chr6:79679200-79698800 Weak transcription Brain Substantia Nigra brain
35 chr6:79679800-79702600 Weak transcription Brain Cingulate Gyrus brain
36 chr6:79680000-79689800 Weak transcription Brain Anterior Caudate brain
37 chr6:79680000-79690000 Weak transcription Fetal Brain Female brain
38 chr6:79680000-79702200 Weak transcription Stomach Smooth Muscle stomach
39 chr6:79680800-79691000 Weak transcription Fetal Heart heart
40 chr6:79681200-79690000 Weak transcription NHDF-Ad bronchial
41 chr6:79681400-79691200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr6:79687000-79692200 Strong transcription Primary T killer memory cells from peripheral blood blood
43 chr6:79687000-79695200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr6:79687000-79698800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr6:79687000-79709400 Strong transcription Duodenum Mucosa Duodenum
46 chr6:79687000-79714400 Strong transcription Liver Liver
47 chr6:79687000-79715800 Strong transcription Primary T cells fromperipheralblood blood
48 chr6:79687000-79715800 Strong transcription Primary T helper cells fromperipheralblood blood
49 chr6:79687000-79736000 Strong transcription HUES6 Cell Line embryonic stem cell
50 chr6:79687000-79736200 Strong transcription Primary monocytes fromperipheralblood blood

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