The 2.0 version of rSNPBase

Variant report

Variant rs12153837
Chromosome Location chr6:79579202-79579203
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:79577800-79587200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:79577800-79587400 Weak transcription Esophagus oesophagus
3 chr6:79577800-79597200 Weak transcription Gastric stomach
4 chr6:79578000-79581400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr6:79578200-79580400 Weak transcription Fetal Muscle Leg muscle
6 chr6:79578200-79580800 Weak transcription Fetal Muscle Trunk muscle
7 chr6:79578200-79581200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr6:79578200-79583000 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr6:79578200-79583400 Weak transcription Primary hematopoietic stem cells blood
10 chr6:79578200-79583400 Weak transcription Colonic Mucosa Colon
11 chr6:79578200-79586200 Weak transcription Lung lung
12 chr6:79578200-79586400 Weak transcription Aorta Aorta
13 chr6:79578200-79587000 Weak transcription Fetal Thymus thymus
14 chr6:79578200-79587200 Weak transcription Thymus Thymus
15 chr6:79578200-79587400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr6:79578200-79587400 Weak transcription Pancreas Pancrea
17 chr6:79578200-79589400 Weak transcription Psoas Muscle Psoas
18 chr6:79578200-79590800 Weak transcription Muscle Satellite Cultured Cells --
19 chr6:79578200-79592400 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr6:79578200-79592800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr6:79578200-79597800 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr6:79578200-79608600 Weak transcription Adipose Nuclei Adipose
23 chr6:79578200-79608600 Weak transcription Left Ventricle heart
24 chr6:79578200-79613600 Weak transcription HSMM muscle
25 chr6:79578400-79580400 Weak transcription Fetal Stomach stomach
26 chr6:79578400-79580600 Weak transcription Fetal Intestine Large intestine
27 chr6:79578400-79581000 Weak transcription Primary T cells from cord blood blood
28 chr6:79578400-79581000 Weak transcription Ovary ovary
29 chr6:79578400-79581400 Weak transcription Osteobl bone
30 chr6:79578400-79582000 Weak transcription Primary B cells from cord blood blood
31 chr6:79578400-79584800 Weak transcription Fetal Kidney kidney
32 chr6:79578400-79585000 Weak transcription Brain Hippocampus Middle brain
33 chr6:79578400-79585200 Weak transcription Fetal Intestine Small intestine
34 chr6:79578400-79585800 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr6:79578400-79586800 Weak transcription Brain Anterior Caudate brain
36 chr6:79578400-79589400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr6:79578400-79589400 Weak transcription Fetal Brain Male brain
38 chr6:79578400-79593400 Weak transcription Brain Cingulate Gyrus brain
39 chr6:79578400-79613800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr6:79578400-79619800 Weak transcription Duodenum Mucosa Duodenum
41 chr6:79578400-79620000 Weak transcription Right Ventricle heart
42 chr6:79578600-79579400 Enhancers GM12878-XiMat blood
43 chr6:79578600-79580000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr6:79578600-79580600 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr6:79578600-79580800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr6:79578600-79580800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr6:79578600-79580800 Weak transcription Brain Germinal Matrix brain
48 chr6:79578600-79580800 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr6:79578600-79581000 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr6:79578600-79581000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015