Variant report

Variant	rs9443621
Chromosome Location	chr6:79576499-79576500
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	UBTF	chr6:79576338-79577238	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:79575800..79578597-chr6:79786334..79789260,2	MCF-7	breast:
2	chr6:79575390..79577053-chr6:79941953..79944016,2	K562	blood:
3	chr6:79576198..79578688-chr6:79580398..79583072,2	K562	blood:

Variant related genes	Relation type
IRAK1BP1	TF binding region
ENSG00000146243	Chromatin interaction
ENSG00000270362	Chromatin interaction
ENSG00000146247	Chromatin interaction

Extended variants
information (count: 128 )
Associated
traits (count: 8 )

rSNPs within LD-proxies of this variant (count:125)

rs_ID	r²[population]
rs1027813	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1044309	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.87[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10455356	0.94[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes]
rs10755377	0.82[ASN][1000 genomes]
rs10943596	0.85[ASN][1000 genomes]
rs10943600	0.88[ASN][1000 genomes]
rs10943605	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs10943608	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap]
rs10943609	0.91[EUR][1000 genomes]
rs10943613	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.83[ASN][1000 genomes]
rs11752126	0.80[ASN][1000 genomes]
rs11754419	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12153837	0.96[ASN][1000 genomes]
rs12193319	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12196457	0.82[ASN][1000 genomes]
rs12196485	0.94[ASN][1000 genomes]
rs12660770	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13191068	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13202531	0.87[EUR][1000 genomes]
rs1354831	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1354832	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1538233	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1538235	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.83[YRI][hapmap];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1547731	1.00[CEU][hapmap];0.80[EUR][1000 genomes]
rs1567167	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1572584	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.91[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1572585	1.00[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];0.89[JPT][hapmap];0.82[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1890229	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.88[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1960542	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1984195	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes]
rs2050659	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2050660	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.82[MEX][hapmap];0.91[MKK][hapmap];0.98[TSI][hapmap];0.86[YRI][hapmap];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2050661	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.91[EUR][1000 genomes]
rs2050662	0.85[EUR][1000 genomes]
rs2050663	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];1.00[TSI][hapmap]
rs2095724	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2105143	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs2152951	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.81[EUR][1000 genomes]
rs2174739	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.91[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.91[EUR][1000 genomes]
rs2174742	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2174743	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2874643	0.94[ASN][1000 genomes]
rs35887627	0.80[ASN][1000 genomes]
rs36128361	0.80[ASN][1000 genomes]
rs3805747	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.91[EUR][1000 genomes]
rs3902856	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs4147183	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4415132	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4421161	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4565265	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4706079	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4706080	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap]
rs4706742	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4706743	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.88[ASN][1000 genomes]
rs4706747	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs55755815	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs56057971	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6454092	0.87[EUR][1000 genomes]
rs6912683	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6915558	0.80[EUR][1000 genomes]
rs6926537	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6937465	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6940637	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7741943	0.89[EUR][1000 genomes]
rs7742034	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.87[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7742431	0.85[EUR][1000 genomes]
rs7753358	0.86[EUR][1000 genomes]
rs7756858	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7760866	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9341754	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9343843	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9343844	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9343848	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9343856	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes]
rs9343860	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9343861	1.00[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs9343863	0.96[CEU][hapmap];0.86[CHB][hapmap];0.97[CHD][hapmap];0.97[GIH][hapmap];0.90[JPT][hapmap];0.83[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9350792	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs9350794	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9350799	0.83[ASN][1000 genomes]
rs9350800	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9352662	0.84[ASN][1000 genomes]
rs9352663	0.94[ASN][1000 genomes]
rs9352664	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9352665	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9352666	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9352667	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9352669	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9352670	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9352675	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9352676	0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9352683	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.87[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9352686	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes]
rs9359354	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9359359	0.83[ASN][1000 genomes]
rs9359360	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.80[ASN][1000 genomes]
rs9359362	0.80[ASN][1000 genomes]
rs9361451	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9361454	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9361455	0.94[ASN][1000 genomes]
rs9361460	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9361462	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9361466	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9361467	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9361472	0.86[EUR][1000 genomes]
rs9361477	1.00[CHB][hapmap];0.95[JPT][hapmap];0.80[ASN][1000 genomes]
rs9361480	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9361482	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs9443622	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9443626	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9443632	0.91[EUR][1000 genomes]
rs9443637	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.83[ASN][1000 genomes]
rs9443638	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9448580	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9448584	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9448587	0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9448588	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9448590	0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9448591	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9448596	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9448597	0.89[EUR][1000 genomes]
rs9448607	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.83[ASN][1000 genomes]
rs9448610	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs946022	0.91[EUR][1000 genomes]
rs971994	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015352	chr6:79521820-79757024	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	esv1839807	chr6:79532610-79606615	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
3	nsv970379	chr6:79571879-79578296	Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:8)

SNP	Gene	Cis/trans	Tissue	Source
rs9443621	IRAK1BP1	cis	Artery Aorta	GTEx
rs9443621	IRAK1BP1	cis	Artery Tibial	GTEx
rs9443621	IRAK1BP1	cis	brain	BrainEAC
rs9443621	IRAK1BP1	cis	frontal cortex	BrainEAC
rs9443621	IRAK1BP1	cis	cerebellar cortex	BrainEAC
rs9443621	IRAK1BP1	cis	Thyroid	GTEx
rs9443621	IRAK1BP1	cis	cerebellum	SCAN
rs9443621	IRAK1BP1	cis	hippocampus	BrainEAC

Chromatin state (count:95 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:79569800-79576800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr6:79574600-79578400	Active TSS	K562	blood
3	chr6:79576000-79576600	Flanking Active TSS	Dnd41	blood
4	chr6:79576000-79576800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
5	chr6:79576000-79576800	Enhancers	Primary T helper naive cells from peripheral blood	blood
6	chr6:79576000-79578600	Active TSS	ES-I3 Cell Line	embryonic stem cell
7	chr6:79576200-79576600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr6:79576200-79576600	Enhancers	Primary T helper cells PMA-I stimulated	--
9	chr6:79576200-79576600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
10	chr6:79576200-79576600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr6:79576200-79576600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr6:79576200-79576600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr6:79576200-79576600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
14	chr6:79576200-79576600	Flanking Active TSS	Brain Anterior Caudate	brain
15	chr6:79576200-79576600	Enhancers	Colonic Mucosa	Colon
16	chr6:79576200-79576600	Enhancers	Fetal Heart	heart
17	chr6:79576200-79576600	Enhancers	Fetal Muscle Leg	muscle
18	chr6:79576200-79576600	Enhancers	Fetal Stomach	stomach
19	chr6:79576200-79576600	Flanking Active TSS	GM12878-XiMat	blood
20	chr6:79576200-79576800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
21	chr6:79576200-79576800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
22	chr6:79576200-79576800	Enhancers	Primary T killer memory cells from peripheral blood	blood
23	chr6:79576200-79576800	Enhancers	Cortex derived primary cultured neurospheres	brain
24	chr6:79576200-79576800	Enhancers	Brain Cingulate Gyrus	brain
25	chr6:79576200-79577400	Active TSS	Adipose Nuclei	Adipose
26	chr6:79576200-79577800	Active TSS	Primary hematopoietic stem cells short term culture	blood
27	chr6:79576200-79578000	Active TSS	Brain Inferior Temporal Lobe	brain
28	chr6:79576200-79578000	Active TSS	Skeletal Muscle Female	skeletal muscle
29	chr6:79576200-79578200	Active TSS	Brain Hippocampus Middle	brain
30	chr6:79576200-79578200	Active TSS	Rectal Mucosa Donor 31	rectum
31	chr6:79576200-79578200	Active TSS	A549	lung
32	chr6:79576200-79578400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
33	chr6:79576200-79578400	Active TSS	Hela-S3	cervix
34	chr6:79576200-79578600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
35	chr6:79576200-79578600	Active TSS	HUES6 Cell Line	embryonic stem cell
36	chr6:79576200-79578600	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr6:79576200-79578600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr6:79576400-79576600	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr6:79576400-79576600	Enhancers	Primary hematopoietic stem cells	blood
40	chr6:79576400-79576600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr6:79576400-79576600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr6:79576400-79576600	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr6:79576400-79576600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
44	chr6:79576400-79576600	Enhancers	Fetal Thymus	thymus
45	chr6:79576400-79576600	Flanking Active TSS	Left Ventricle	heart
46	chr6:79576400-79576600	Flanking Active TSS	Right Ventricle	heart
47	chr6:79576400-79576600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
48	chr6:79576400-79576600	Flanking Active TSS	Thymus	Thymus
49	chr6:79576400-79576600	Flanking Active TSS	HepG2	liver
50	chr6:79576400-79576600	Enhancers	HSMM	muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links