Variant report

Variant rs2181891
Chromosome Location chr13:52553358-52553359
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52494400-52558000 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr13:52513400-52555400 Weak transcription Brain Hippocampus Middle brain
3 chr13:52516600-52554000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr13:52516800-52555400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr13:52530200-52555400 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr13:52534400-52555400 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr13:52540000-52554600 Weak transcription HSMMtube muscle
8 chr13:52541400-52554800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr13:52544800-52554400 Weak transcription Brain Anterior Caudate brain
10 chr13:52544800-52556600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr13:52545000-52555400 Weak transcription Adipose Nuclei Adipose
12 chr13:52545000-52555600 Weak transcription Aorta Aorta
13 chr13:52545400-52555400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr13:52549000-52555400 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr13:52549000-52555600 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr13:52550200-52554200 Weak transcription Placenta Amnion Placenta Amnion
17 chr13:52551600-52555800 Enhancers Fetal Intestine Small intestine
18 chr13:52551800-52554800 Enhancers Fetal Heart heart
19 chr13:52552600-52553600 Flanking Active TSS K562 blood
20 chr13:52552600-52554400 Enhancers Fetal Intestine Large intestine
21 chr13:52552600-52555800 Enhancers Stomach Mucosa stomach
22 chr13:52552800-52553400 Enhancers Duodenum Mucosa Duodenum
23 chr13:52552800-52553400 Enhancers Sigmoid Colon Sigmoid Colon
24 chr13:52553000-52553400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr13:52553000-52553400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr13:52553000-52553400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr13:52553000-52553400 Enhancers Placenta Placenta
28 chr13:52553000-52553400 Enhancers Left Ventricle heart
29 chr13:52553000-52553400 Enhancers Ovary ovary
30 chr13:52553000-52553400 Enhancers Pancreas Pancrea
31 chr13:52553000-52553400 Enhancers Psoas Muscle Psoas
32 chr13:52553000-52553400 Enhancers Right Atrium heart
33 chr13:52553000-52553400 Enhancers Right Ventricle heart
34 chr13:52553000-52553600 Flanking Active TSS Liver Liver
35 chr13:52553000-52555800 Enhancers Fetal Lung lung
36 chr13:52553200-52556800 Enhancers HepG2 liver

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