Variant report

Variant rs2897964
Chromosome Location chr13:52605675-52605676
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52588000-52609200 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr13:52588000-52617400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr13:52595000-52611200 Weak transcription Psoas Muscle Psoas
4 chr13:52595600-52606600 Weak transcription Brain Angular Gyrus brain
5 chr13:52596600-52614000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr13:52598200-52606000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr13:52598800-52606600 Weak transcription Rectal Smooth Muscle rectum
8 chr13:52599000-52606400 Weak transcription Brain Substantia Nigra brain
9 chr13:52599000-52611000 Weak transcription Fetal Brain Male brain
10 chr13:52599800-52605800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr13:52600000-52609800 Weak transcription Stomach Mucosa stomach
12 chr13:52600200-52613800 Weak transcription Colon Smooth Muscle Colon
13 chr13:52600200-52613800 Weak transcription Small Intestine intestine
14 chr13:52600400-52627600 Weak transcription HSMMtube muscle
15 chr13:52600800-52606600 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr13:52600800-52609600 Weak transcription Esophagus oesophagus
17 chr13:52600800-52611400 Weak transcription Brain Inferior Temporal Lobe brain
18 chr13:52601000-52619400 Weak transcription Brain Hippocampus Middle brain
19 chr13:52601200-52609400 Weak transcription HMEC breast
20 chr13:52601200-52610000 Weak transcription Primary B cells from cord blood blood
21 chr13:52601400-52606000 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr13:52601600-52609600 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr13:52602400-52605800 Strong transcription Thymus Thymus
24 chr13:52602600-52606000 Strong transcription Cortex derived primary cultured neurospheres brain
25 chr13:52603000-52607000 Weak transcription GM12878-XiMat blood
26 chr13:52603200-52613400 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr13:52603400-52605800 Weak transcription H9 Cell Line embryonic stem cell
28 chr13:52603400-52605800 Weak transcription Primary T cells fromperipheralblood blood
29 chr13:52603400-52606000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr13:52603400-52606800 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr13:52603400-52607000 Weak transcription Duodenum Mucosa Duodenum
32 chr13:52603400-52608400 Weak transcription Adipose Nuclei Adipose
33 chr13:52603600-52606400 Weak transcription Brain Anterior Caudate brain
34 chr13:52603600-52606800 Weak transcription Dnd41 blood
35 chr13:52603600-52608200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr13:52603600-52610000 Weak transcription Fetal Kidney kidney
37 chr13:52603600-52610200 Weak transcription Left Ventricle heart
38 chr13:52603800-52606600 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr13:52603800-52607400 Weak transcription Osteobl bone
40 chr13:52603800-52609600 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr13:52603800-52610200 Weak transcription Gastric stomach
42 chr13:52604000-52608400 Weak transcription Brain Germinal Matrix brain
43 chr13:52604000-52612400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr13:52604000-52615200 Weak transcription Fetal Intestine Large intestine
45 chr13:52604200-52606600 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr13:52604200-52606800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr13:52604200-52607200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr13:52604200-52608000 Weak transcription Pancreas Pancrea
49 chr13:52604200-52608200 Weak transcription Fetal Lung lung
50 chr13:52604200-52608600 Weak transcription Primary hematopoietic stem cells blood

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