The 2.0 version of rSNPBase

Variant report

Variant rs2183000
Chromosome Location chr6:37066406-37066407
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37052200-37070000 Weak transcription Right Atrium heart
2 chr6:37052800-37069800 Weak transcription Ovary ovary
3 chr6:37058000-37069000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr6:37061400-37069000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr6:37061400-37069600 Weak transcription Brain Hippocampus Middle brain
6 chr6:37061400-37070000 Weak transcription Pancreas Pancrea
7 chr6:37061600-37066600 Weak transcription GM12878-XiMat blood
8 chr6:37061600-37068800 Weak transcription Duodenum Mucosa Duodenum
9 chr6:37061800-37068800 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr6:37061800-37069800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr6:37061800-37069800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr6:37062000-37067200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr6:37062000-37067200 Weak transcription HMEC breast
14 chr6:37062400-37069600 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr6:37062400-37069600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr6:37062400-37069800 Weak transcription NHEK skin
17 chr6:37062600-37069800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr6:37062800-37069800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr6:37063000-37066800 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr6:37063000-37069800 Weak transcription Primary T cells fromperipheralblood blood
21 chr6:37063200-37070000 Weak transcription Esophagus oesophagus
22 chr6:37063400-37067200 Weak transcription Spleen Spleen
23 chr6:37063400-37069800 Weak transcription Stomach Mucosa stomach
24 chr6:37063600-37068800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr6:37063600-37071000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr6:37064000-37066600 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr6:37064000-37069600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr6:37064200-37067600 Weak transcription Placenta Placenta
29 chr6:37064200-37068800 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr6:37064200-37068800 Weak transcription K562 blood
31 chr6:37064200-37069000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr6:37064200-37070000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr6:37064200-37071200 Weak transcription Small Intestine intestine
34 chr6:37064400-37069800 Weak transcription Brain Substantia Nigra brain
35 chr6:37064400-37070000 Weak transcription Psoas Muscle Psoas
36 chr6:37064600-37068800 Weak transcription Fetal Intestine Large intestine
37 chr6:37064600-37068800 Weak transcription Fetal Intestine Small intestine
38 chr6:37064800-37066600 Weak transcription Adipose Nuclei Adipose
39 chr6:37064800-37068600 Weak transcription Fetal Muscle Leg muscle
40 chr6:37064800-37068800 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr6:37064800-37069800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr6:37064800-37069800 Weak transcription Brain Anterior Caudate brain
43 chr6:37065600-37068200 Enhancers HepG2 liver
44 chr6:37065600-37068600 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015