The 2.0 version of rSNPBase

Variant report

Variant rs58083075
Chromosome Location chr6:37063513-37063514
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37052200-37070000 Weak transcription Right Atrium heart
2 chr6:37052800-37069800 Weak transcription Ovary ovary
3 chr6:37058000-37069000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr6:37060400-37064200 Enhancers Primary hematopoietic stem cells short term culture blood
5 chr6:37060400-37064600 Enhancers Fetal Intestine Large intestine
6 chr6:37060600-37064800 Enhancers Adipose Nuclei Adipose
7 chr6:37060800-37063600 Enhancers Placenta Placenta
8 chr6:37061200-37064800 Enhancers HepG2 liver
9 chr6:37061400-37069000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr6:37061400-37069600 Weak transcription Brain Hippocampus Middle brain
11 chr6:37061400-37070000 Weak transcription Pancreas Pancrea
12 chr6:37061600-37066600 Weak transcription GM12878-XiMat blood
13 chr6:37061600-37068800 Weak transcription Duodenum Mucosa Duodenum
14 chr6:37061800-37064000 Weak transcription Brain Anterior Caudate brain
15 chr6:37061800-37068800 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr6:37061800-37069800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr6:37061800-37069800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr6:37062000-37067200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr6:37062000-37067200 Weak transcription HMEC breast
20 chr6:37062400-37064000 Enhancers Primary neutrophils fromperipheralblood blood
21 chr6:37062400-37069600 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr6:37062400-37069600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:37062400-37069800 Weak transcription NHEK skin
24 chr6:37062600-37069800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr6:37062800-37064800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr6:37062800-37069800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr6:37063000-37063600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr6:37063000-37064600 Enhancers Fetal Intestine Small intestine
29 chr6:37063000-37064800 Enhancers Skeletal Muscle Male skeletal muscle
30 chr6:37063000-37065000 Enhancers Skeletal Muscle Female skeletal muscle
31 chr6:37063000-37066800 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr6:37063000-37069800 Weak transcription Primary T cells fromperipheralblood blood
33 chr6:37063200-37063600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
34 chr6:37063200-37064000 Weak transcription Liver Liver
35 chr6:37063200-37064000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
36 chr6:37063200-37064400 Enhancers Psoas Muscle Psoas
37 chr6:37063200-37064800 Enhancers Fetal Muscle Leg muscle
38 chr6:37063200-37070000 Weak transcription Esophagus oesophagus
39 chr6:37063400-37063600 Enhancers K562 blood
40 chr6:37063400-37064200 Enhancers Small Intestine intestine
41 chr6:37063400-37067200 Weak transcription Spleen Spleen
42 chr6:37063400-37069800 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015