Variant report

Variant	rs2240326
Chromosome Location	chr3:50128386-50128387
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr3:50128066-50128718	GM12878	blood:	n/a	n/a
2	POLR2A	chr3:50128361-50128661	GM12878	blood:	n/a	n/a
3	MXI1	chr3:50125926-50129106	IMR90	lung:	n/a	n/a
4	POLR2A	chr3:50128318-50128666	GM12891	blood:	n/a	n/a
5	POLR2A	chr3:50128343-50128612	K562	blood:	n/a	n/a
6	POLR2A	chr3:50128063-50128396	K562	blood:	n/a	n/a
7	MAFK	chr3:50128376-50128803	Hela-S3	cervix:	n/a	chr3:50128613-50128627 chr3:50128610-50128630 chr3:50128615-50128630 chr3:50128612-50128628 chr3:50128614-50128624
8	MAFK	chr3:50128254-50128969	IMR90	lung:	n/a	chr3:50128613-50128627 chr3:50128610-50128630 chr3:50128615-50128630 chr3:50128612-50128628 chr3:50128614-50128624
9	WRNIP1	chr3:50128237-50128602	GM12878	blood:	n/a	n/a
10	POLR2A	chr3:50127867-50129131	GM12878	blood:	n/a	n/a
11	USF2	chr3:50128332-50128586	HepG2	liver:	n/a	n/a
12	MAFK	chr3:50127142-50128915	GM12878	blood:	n/a	chr3:50128613-50128627 chr3:50128610-50128630 chr3:50128615-50128630 chr3:50128612-50128628 chr3:50128614-50128624
13	MAFF	chr3:50128183-50128808	K562	blood:	n/a	chr3:50128613-50128627 chr3:50128614-50128632
14	MAFF	chr3:50128379-50128816	HepG2	liver:	n/a	chr3:50128613-50128627 chr3:50128614-50128632
15	MAFK	chr3:50128194-50128882	HepG2	liver:	n/a	chr3:50128613-50128627 chr3:50128610-50128630 chr3:50128615-50128630 chr3:50128612-50128628 chr3:50128614-50128624

No.	Distal block	Cell Line	Cell type
1	chr3:50125762..50129022-chr3:50137938..50141076,4	K562	blood:
2	chr3:49966762..49969614-chr3:50125142..50129125,3	K562	blood:
3	chr3:50103040..50106585-chr3:50126937..50129142,3	K562	blood:
4	chr3:50127396..50129156-chr3:50141876..50143415,2	K562	blood:
5	chr3:49976300..49979550-chr3:50125389..50128777,3	K562	blood:

Variant related genes	Relation type
RBM5	TF binding region
ENSG00000003756	Chromatin interaction
ENSG00000004534	Chromatin interaction
ENSG00000164077	Chromatin interaction

Extended variants
information (count: 106 )
Associated
traits (count: 20 )

rSNPs within LD-proxies of this variant (count:100)

rs_ID	r²[population]
rs10049087	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1061474	0.90[CHD][hapmap]
rs11130228	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11130233	0.96[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs11130234	0.81[ASN][1000 genomes]
rs1138536	0.90[CHD][hapmap]
rs11709573	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs11713562	0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs12485600	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12496973	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap]
rs12634780	0.82[JPT][hapmap]
rs13060128	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap];0.81[ASN][1000 genomes]
rs17657664	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs17657688	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs2008877	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2013208	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2071206	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2071207	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2230590	0.93[ASW][hapmap];0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap]
rs2236939	0.82[JPT][hapmap]
rs2240327	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2240328	0.85[CHD][hapmap];0.82[JPT][hapmap]
rs2240329	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.96[TSI][hapmap];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2245365	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2247510	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs2252833	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap]
rs2280406	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.93[TSI][hapmap]
rs2301166	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2352969	0.85[CHD][hapmap];0.82[JPT][hapmap]
rs2352984	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs2353579	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs2353586	0.83[AMR][1000 genomes]
rs2353587	0.82[AMR][1000 genomes]
rs2526743	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2526747	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs2526748	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2526751	0.93[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.96[TSI][hapmap];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2526754	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2624816	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2624819	0.82[JPT][hapmap]
rs2624821	0.85[CHD][hapmap];0.82[JPT][hapmap]
rs2624822	0.82[JPT][hapmap]
rs2624823	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2624824	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2624825	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2624826	0.90[CHD][hapmap]
rs2624834	0.85[CHD][hapmap];0.82[JPT][hapmap]
rs2624843	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap]
rs2624847	0.85[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs2624853	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2681779	0.85[CHD][hapmap];0.82[JPT][hapmap]
rs2856234	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2856236	1.00[CEU][hapmap];0.83[CHB][hapmap];1.00[GIH][hapmap];0.84[JPT][hapmap];0.98[TSI][hapmap];0.89[EUR][1000 genomes]
rs2856237	0.90[CHD][hapmap]
rs2856238	0.90[CHD][hapmap]
rs2883057	0.93[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.96[TSI][hapmap]
rs34080578	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs34831713	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3733133	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3774733	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs3774734	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs3774759	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs4688686	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4688689	0.93[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];0.96[TSI][hapmap];0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4688690	0.93[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.96[TSI][hapmap];0.81[ASN][1000 genomes]
rs4688753	0.82[JPT][hapmap]
rs4688755	0.86[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4688757	0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4688758	0.93[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.96[TSI][hapmap];0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs6446193	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap];0.92[ASN][1000 genomes]
rs6446202	0.82[JPT][hapmap]
rs66851636	0.80[ASN][1000 genomes]
rs6762477	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs6765484	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap]
rs6767381	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs6771546	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap]
rs6772095	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap]
rs6774354	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs6780731	0.81[ASN][1000 genomes]
rs6792892	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap]
rs7061	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs739431	0.82[JPT][hapmap]
rs7428430	0.86[CEU][hapmap];0.83[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7430334	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs7613875	1.00[ASW][hapmap];0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.90[MEX][hapmap];1.00[MKK][hapmap];0.85[TSI][hapmap];1.00[YRI][hapmap]
rs7615206	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs7621026	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap]
rs7621352	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7628058	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7642692	0.82[JPT][hapmap]
rs7642934	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7650214	0.81[ASN][1000 genomes]
rs868891	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs9311446	0.93[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.96[TSI][hapmap];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9810125	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9814664	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9853222	0.81[ASN][1000 genomes]
rs9856572	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9861216	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap];0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs9866695	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap];0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876767	chr3:49918751-50153356	Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
2	nsv460527	chr3:50028385-50153356	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
3	nsv590249	chr3:50028385-50153356	Weak transcription Active TSS Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
4	nsv834690	chr3:50101835-50267584	Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
5	nsv515986	chr3:50104307-50267584	Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
6	nsv432418	chr3:50114496-50224196	Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	18 gene(s)	inside rSNPs	diseases

mRNA abundance (count:20)

SNP	Gene	Cis/trans	Tissue	Source
rs2240326	RBM6	cis	Thyroid	GTEx
rs2240326	RBM6	cis	Whole Blood	GTEx
rs2240326	RBM6	cis	Esophagus Mucosa	GTEx
rs2240326	RBM6	cis	cerebellum	SCAN
rs2240326	RBM6	cis	parietal	SCAN
rs2240326	RBM6	cis	lung	GTEx
rs2240326	RBM6	cis	Artery Aorta	GTEx
rs2240326	RBM6	Cis_1M	lymphoblastoid	RTeQTL
rs2240326	RBM6	cis	Stomach	GTEx
rs2240326	RBM6	cis	Esophagus Muscularis	GTEx
rs2240326	CYB561D2	cis	cerebellum	SCAN
rs2240326	RBM6	cis	Nerve Tibial	GTEx
rs2240326	RNF123	cis	parietal	SCAN
rs2240326	RNF123	cis	cerebellum	SCAN
rs2240326	RBM6	cis	Artery Tibial	GTEx
rs2240326	RBM6	cis	Heart Left Ventricle	GTEx
rs2240326	RBM6	cis	lymphoblastoid	seeQTL
rs2240326	RBM6	cis	Adipose Subcutaneous	GTEx
rs2240326	ARIH2	cis	cerebellum	SCAN
rs2240326	RBM6	cis	Skin Sun Exposed Lower leg	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:50126200-50128400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr3:50126400-50128400	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
3	chr3:50126600-50128600	Transcr. at gene 5' and 3'	Dnd41	blood
4	chr3:50127400-50128400	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
5	chr3:50127400-50128400	Flanking Active TSS	Adipose Nuclei	Adipose
6	chr3:50127400-50128400	Enhancers	Small Intestine	intestine
7	chr3:50127400-50129400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr3:50127400-50129400	Weak transcription	Pancreas	Pancrea
9	chr3:50127400-50129400	Weak transcription	Spleen	Spleen
10	chr3:50127400-50132800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
11	chr3:50127400-50150000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr3:50127600-50128400	Transcr. at gene 5' and 3'	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr3:50127600-50128400	Transcr. at gene 5' and 3'	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr3:50127600-50128400	Flanking Active TSS	Colonic Mucosa	Colon
15	chr3:50127600-50128400	Transcr. at gene 5' and 3'	Hela-S3	cervix
16	chr3:50127600-50129000	Transcr. at gene 5' and 3'	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr3:50127600-50129000	Enhancers	Stomach Mucosa	stomach
18	chr3:50127600-50129600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr3:50127800-50128400	Transcr. at gene 5' and 3'	ES-I3 Cell Line	embryonic stem cell
20	chr3:50127800-50128400	Transcr. at gene 5' and 3'	HUES6 Cell Line	embryonic stem cell
21	chr3:50127800-50128400	Transcr. at gene 5' and 3'	HUES64 Cell Line	embryonic stem cell
22	chr3:50127800-50128400	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
23	chr3:50127800-50128400	Transcr. at gene 5' and 3'	Fetal Muscle Leg	muscle
24	chr3:50127800-50128400	Transcr. at gene 5' and 3'	Rectal Mucosa Donor 31	rectum
25	chr3:50127800-50128400	Transcr. at gene 5' and 3'	Skeletal Muscle Male	skeletal muscle
26	chr3:50127800-50128400	Transcr. at gene 5' and 3'	Skeletal Muscle Female	skeletal muscle
27	chr3:50127800-50128400	Transcr. at gene 5' and 3'	Stomach Smooth Muscle	stomach
28	chr3:50127800-50128400	Transcr. at gene 5' and 3'	Monocytes-CD14+_RO01746	blood
29	chr3:50127800-50128600	Transcr. at gene 5' and 3'	iPS-20b Cell Line	embryonic stem cell
30	chr3:50127800-50128600	Transcr. at gene 5' and 3'	Primary B cells from cord blood	blood
31	chr3:50127800-50128600	Transcr. at gene 5' and 3'	Primary T cells from cord blood	blood
32	chr3:50127800-50128600	Transcr. at gene 5' and 3'	Primary hematopoietic stem cells short term culture	blood
33	chr3:50127800-50128600	Transcr. at gene 5' and 3'	Primary T regulatory cells fromperipheralblood	blood
34	chr3:50127800-50128600	Transcr. at gene 5' and 3'	Brain Angular Gyrus	brain
35	chr3:50127800-50128600	Transcr. at gene 5' and 3'	Brain Cingulate Gyrus	brain
36	chr3:50127800-50128600	Transcr. at gene 5' and 3'	Duodenum Smooth Muscle	Duodenum
37	chr3:50127800-50128600	Transcr. at gene 5' and 3'	Fetal Kidney	kidney
38	chr3:50127800-50128600	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
39	chr3:50127800-50128600	Transcr. at gene 5' and 3'	Fetal Lung	lung
40	chr3:50127800-50128600	Genic enhancers	Placenta	Placenta
41	chr3:50127800-50128600	Genic enhancers	Sigmoid Colon	Sigmoid Colon
42	chr3:50127800-50128600	Transcr. at gene 5' and 3'	A549	lung
43	chr3:50127800-50128600	Transcr. at gene 5' and 3'	HepG2	liver
44	chr3:50127800-50128600	Transcr. at gene 5' and 3'	NHDF-Ad	bronchial
45	chr3:50127800-50128600	Transcr. at gene 5' and 3'	Osteobl	bone
46	chr3:50127800-50128800	Transcr. at gene 5' and 3'	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr3:50127800-50128800	Transcr. at gene 5' and 3'	HUVEC	blood vessel
48	chr3:50127800-50129000	Transcr. at gene 5' and 3'	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr3:50127800-50129200	Transcr. at gene 5' and 3'	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr3:50127800-50129200	Genic enhancers	Primary monocytes fromperipheralblood	blood

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