Variant report

Variant rs2526743
Chromosome Location chr3:50115245-50115246
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50082000-50115600 Strong transcription Fetal Intestine Large intestine
2 chr3:50082200-50116000 Strong transcription Fetal Muscle Leg muscle
3 chr3:50082400-50115800 Strong transcription Fetal Muscle Trunk muscle
4 chr3:50082400-50116200 Strong transcription Fetal Thymus thymus
5 chr3:50082600-50116200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr3:50084200-50116600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr3:50084400-50115800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr3:50085000-50115800 Strong transcription Liver Liver
9 chr3:50085200-50115800 Strong transcription Duodenum Smooth Muscle Duodenum
10 chr3:50087200-50115800 Strong transcription Primary T helper naive cells fromperipheralblood blood
11 chr3:50087800-50115800 Strong transcription Fetal Adrenal Gland Adrenal Gland
12 chr3:50088400-50115800 Strong transcription Thymus Thymus
13 chr3:50088600-50115400 Strong transcription Primary hematopoietic stem cells short term culture blood
14 chr3:50089000-50115400 Strong transcription Skeletal Muscle Female skeletal muscle
15 chr3:50089200-50116000 Strong transcription Brain Germinal Matrix brain
16 chr3:50089200-50116200 Strong transcription Duodenum Mucosa Duodenum
17 chr3:50089200-50116400 Strong transcription Cortex derived primary cultured neurospheres brain
18 chr3:50089400-50116000 Strong transcription Stomach Smooth Muscle stomach
19 chr3:50089800-50115800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr3:50090400-50115800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr3:50091200-50115400 Strong transcription Breast Myoepithelial Primary Cells Breast
22 chr3:50093800-50116000 Strong transcription Fetal Brain Female brain
23 chr3:50094200-50115600 Strong transcription Fetal Stomach stomach
24 chr3:50095000-50116000 Strong transcription Brain Angular Gyrus brain
25 chr3:50096000-50115800 Strong transcription Lung lung
26 chr3:50097200-50116200 Strong transcription Brain Cingulate Gyrus brain
27 chr3:50097600-50115800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr3:50104000-50115800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr3:50104200-50123400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr3:50105800-50115400 Strong transcription Right Ventricle heart
31 chr3:50105800-50116200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr3:50105800-50116200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr3:50105800-50116400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr3:50106000-50116000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr3:50106000-50116200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr3:50106200-50115400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr3:50106200-50116000 Strong transcription Osteobl bone
38 chr3:50106200-50125800 Weak transcription Stomach Mucosa stomach
39 chr3:50106400-50115800 Strong transcription HSMM muscle
40 chr3:50106400-50116000 Strong transcription Fetal Intestine Small intestine
41 chr3:50106600-50115600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr3:50107000-50115800 Strong transcription Placenta Placenta
43 chr3:50108200-50115600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr3:50108800-50126000 Weak transcription Fetal Heart heart
45 chr3:50110200-50126000 Weak transcription NHLF lung
46 chr3:50110600-50125800 Weak transcription Small Intestine intestine
47 chr3:50111000-50125800 Weak transcription Colonic Mucosa Colon
48 chr3:50111000-50126000 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr3:50111200-50119000 Weak transcription Fetal Brain Male brain
50 chr3:50111200-50119800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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