Variant report

Variant	rs2624853
Chromosome Location	chr3:50128893-50128894
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MXI1	chr3:50125926-50129106	IMR90	lung:	n/a	n/a
2	CUX1	chr3:50128791-50128991	GM12878	blood:	n/a	n/a
3	MAFK	chr3:50128254-50128969	IMR90	lung:	n/a	chr3:50128613-50128627 chr3:50128610-50128630 chr3:50128615-50128630 chr3:50128612-50128628 chr3:50128614-50128624
4	POLR2A	chr3:50127867-50129131	GM12878	blood:	n/a	n/a
5	MAFK	chr3:50127142-50128915	GM12878	blood:	n/a	chr3:50128613-50128627 chr3:50128610-50128630 chr3:50128615-50128630 chr3:50128612-50128628 chr3:50128614-50128624

No.	Distal block	Cell Line	Cell type
1	chr3:50125762..50129022-chr3:50137938..50141076,4	K562	blood:
2	chr3:49966762..49969614-chr3:50125142..50129125,3	K562	blood:
3	chr3:50103040..50106585-chr3:50126937..50129142,3	K562	blood:
4	chr3:50125097..50128236-chr3:50128554..50131975,3	MCF-7	breast:
5	chr3:50127396..50129156-chr3:50141876..50143415,2	K562	blood:

Variant related genes	Relation type
RBM5	TF binding region
ENSG00000164077	Chromatin interaction
ENSG00000003756	Chromatin interaction
ENSG00000004534	Chromatin interaction

Extended variants
information (count: 105 )
Associated
traits (count: 20 )

rSNPs within LD-proxies of this variant (count:99)

rs_ID	r²[population]
rs10049087	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1061474	0.90[CHD][hapmap]
rs11130228	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs11130233	0.96[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.81[ASN][1000 genomes]
rs11130234	0.81[ASN][1000 genomes]
rs1138536	0.90[CHD][hapmap]
rs11709573	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs11713562	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs12485600	0.81[ASN][1000 genomes]
rs12496973	0.94[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap]
rs12634780	0.82[JPT][hapmap]
rs13060128	0.94[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs17657664	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs17657688	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs2008877	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2013208	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2071206	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2071207	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2230590	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap]
rs2236939	0.82[JPT][hapmap]
rs2240326	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2240327	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2240328	0.85[CHD][hapmap];0.82[JPT][hapmap]
rs2240329	0.94[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.95[MEX][hapmap];0.97[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2245365	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2247510	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs2252833	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];0.96[TSI][hapmap];0.93[YRI][hapmap]
rs2280406	0.87[ASW][hapmap];0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];0.95[MEX][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap]
rs2301166	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2352969	0.85[CHD][hapmap];0.82[JPT][hapmap]
rs2352984	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs2353579	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2353587	0.81[AMR][1000 genomes]
rs2526743	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2526747	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs2526748	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];0.96[TSI][hapmap];0.93[YRI][hapmap];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2526751	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap];0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2526754	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2624816	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2624819	0.82[JPT][hapmap]
rs2624821	0.85[CHD][hapmap];0.82[JPT][hapmap]
rs2624822	0.82[JPT][hapmap]
rs2624823	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2624824	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2624825	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2624826	0.90[CHD][hapmap]
rs2624834	0.85[CHD][hapmap];0.82[JPT][hapmap]
rs2624843	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];0.96[TSI][hapmap];0.93[YRI][hapmap]
rs2624847	0.85[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs2681779	0.85[CHD][hapmap];0.82[JPT][hapmap]
rs2856234	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];0.96[TSI][hapmap];0.93[YRI][hapmap];0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2856236	1.00[CEU][hapmap];0.83[CHB][hapmap];1.00[GIH][hapmap];0.84[JPT][hapmap];0.98[TSI][hapmap];0.89[EUR][1000 genomes]
rs2856237	0.90[CHD][hapmap]
rs2856238	0.90[CHD][hapmap]
rs2883057	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap]
rs34080578	0.81[ASN][1000 genomes]
rs34831713	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3733133	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3774733	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs3774734	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs3774759	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs4688686	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4688689	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.96[TSI][hapmap];0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4688690	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap];0.81[ASN][1000 genomes]
rs4688753	0.82[JPT][hapmap]
rs4688755	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap];0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4688757	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4688758	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap];0.81[ASN][1000 genomes]
rs6446193	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.96[TSI][hapmap];0.89[YRI][hapmap];0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6446202	0.82[JPT][hapmap]
rs66851636	0.80[ASN][1000 genomes]
rs6762477	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs6765484	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.96[TSI][hapmap];0.93[YRI][hapmap];0.83[AMR][1000 genomes]
rs6767381	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs6771546	0.94[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap]
rs6772095	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap]
rs6774354	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs6780731	0.81[ASN][1000 genomes]
rs6792892	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap]
rs7061	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs739431	0.82[JPT][hapmap]
rs7428430	0.86[CEU][hapmap];0.83[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7430334	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs7613875	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.85[TSI][hapmap]
rs7615206	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs7621026	0.94[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap]
rs7621352	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7628058	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7642692	0.82[JPT][hapmap]
rs7642934	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7650214	0.81[ASN][1000 genomes]
rs868891	0.90[CHD][hapmap];0.82[JPT][hapmap]
rs9311446	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9810125	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9814664	0.94[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9853222	0.81[ASN][1000 genomes]
rs9856572	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9861216	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];0.96[TSI][hapmap];0.93[YRI][hapmap];0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs9866695	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[TSI][hapmap];0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876767	chr3:49918751-50153356	Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
2	nsv460527	chr3:50028385-50153356	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
3	nsv590249	chr3:50028385-50153356	Weak transcription Active TSS Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
4	nsv834690	chr3:50101835-50267584	Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
5	nsv515986	chr3:50104307-50267584	Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
6	nsv432418	chr3:50114496-50224196	Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	18 gene(s)	inside rSNPs	diseases

mRNA abundance (count:20)

SNP	Gene	Cis/trans	Tissue	Source
rs2624853	RBM6	Cis_1M	lymphoblastoid	RTeQTL
rs2624853	RBM6	cis	Stomach	GTEx
rs2624853	ARIH2	cis	cerebellum	SCAN
rs2624853	RBM6	cis	Nerve Tibial	GTEx
rs2624853	RBM6	cis	parietal	SCAN
rs2624853	RBM6	cis	Whole Blood	GTEx
rs2624853	RBM6	cis	Skin Sun Exposed Lower leg	GTEx
rs2624853	RBM6	cis	Adipose Subcutaneous	GTEx
rs2624853	RBM6	cis	Esophagus Mucosa	GTEx
rs2624853	RBM6	cis	lymphoblastoid	seeQTL
rs2624853	RNF123	cis	cerebellum	SCAN
rs2624853	RBM6	cis	Esophagus Muscularis	GTEx
rs2624853	RBM6	cis	cerebellum	SCAN
rs2624853	RBM6	cis	Thyroid	GTEx
rs2624853	CYB561D2	cis	cerebellum	SCAN
rs2624853	RNF123	cis	parietal	SCAN
rs2624853	RBM6	cis	Artery Aorta	GTEx
rs2624853	RBM6	cis	lung	GTEx
rs2624853	RBM6	cis	Heart Left Ventricle	GTEx
rs2624853	RBM6	cis	Artery Tibial	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:50127400-50129400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr3:50127400-50129400	Weak transcription	Pancreas	Pancrea
3	chr3:50127400-50129400	Weak transcription	Spleen	Spleen
4	chr3:50127400-50132800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr3:50127400-50150000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr3:50127600-50129000	Transcr. at gene 5' and 3'	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr3:50127600-50129000	Enhancers	Stomach Mucosa	stomach
8	chr3:50127600-50129600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr3:50127800-50129000	Transcr. at gene 5' and 3'	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr3:50127800-50129200	Transcr. at gene 5' and 3'	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr3:50127800-50129200	Genic enhancers	Primary monocytes fromperipheralblood	blood
12	chr3:50127800-50130000	Genic enhancers	Primary T helper memory cells from peripheral blood 1	blood
13	chr3:50127800-50157800	Strong transcription	H9 Cell Line	embryonic stem cell
14	chr3:50128000-50129000	Genic enhancers	Primary neutrophils fromperipheralblood	blood
15	chr3:50128000-50129000	Genic enhancers	Primary B cells from peripheral blood	blood
16	chr3:50128000-50129000	Transcr. at gene 5' and 3'	Primary hematopoietic stem cells	blood
17	chr3:50128000-50129000	Transcr. at gene 5' and 3'	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr3:50128000-50129000	Genic enhancers	Primary mononuclear cells fromperipheralblood	Blood
19	chr3:50128000-50129000	Transcr. at gene 5' and 3'	Fetal Brain Female	brain
20	chr3:50128000-50129200	Transcr. at gene 5' and 3'	Breast Myoepithelial Primary Cells	Breast
21	chr3:50128000-50129800	Genic enhancers	Primary T killer naive cells fromperipheralblood	blood
22	chr3:50128000-50134600	Strong transcription	Esophagus	oesophagus
23	chr3:50128000-50152600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr3:50128000-50157800	Strong transcription	HUES48 Cell Line	embryonic stem cell
25	chr3:50128000-50158000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
26	chr3:50128000-50158000	Strong transcription	Fetal Muscle Trunk	muscle
27	chr3:50128200-50129000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr3:50128200-50129000	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
29	chr3:50128200-50129600	Transcr. at gene 5' and 3'	GM12878-XiMat	blood
30	chr3:50128200-50130200	Genic enhancers	Primary T helper cells fromperipheralblood	blood
31	chr3:50128200-50134600	Strong transcription	iPS-15b Cell Line	embryonic stem cell
32	chr3:50128200-50135000	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr3:50128200-50152800	Strong transcription	H1 Cell Line	embryonic stem cell
34	chr3:50128200-50158800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
35	chr3:50128400-50129000	Genic enhancers	Colon Smooth Muscle	Colon
36	chr3:50128400-50129000	Genic enhancers	Fetal Intestine Large	intestine
37	chr3:50128400-50129000	Genic enhancers	Rectal Mucosa Donor 31	rectum
38	chr3:50128400-50129000	Genic enhancers	Rectal Smooth Muscle	rectum
39	chr3:50128400-50129000	Genic enhancers	Monocytes-CD14+_RO01746	blood
40	chr3:50128400-50129200	Strong transcription	ES-I3 Cell Line	embryonic stem cell
41	chr3:50128400-50129200	Genic enhancers	Primary T helper memory cells from peripheral blood 2	blood
42	chr3:50128400-50129200	Genic enhancers	Primary T killer memory cells from peripheral blood	blood
43	chr3:50128400-50129200	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
44	chr3:50128400-50129200	Genic enhancers	Brain Hippocampus Middle	brain
45	chr3:50128400-50129200	Genic enhancers	Rectal Mucosa Donor 29	rectum
46	chr3:50128400-50129200	Genic enhancers	Skeletal Muscle Male	skeletal muscle
47	chr3:50128400-50129200	Genic enhancers	Skeletal Muscle Female	skeletal muscle
48	chr3:50128400-50129200	Genic enhancers	Stomach Smooth Muscle	stomach
49	chr3:50128400-50129200	Genic enhancers	Hela-S3	cervix
50	chr3:50128400-50129600	Genic enhancers	Thymus	Thymus

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