Variant report

Variant	rs2244626
Chromosome Location	chr5:167539615-167539616
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs2337119	0.88[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2569049	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2617969	0.83[ASN][1000 genomes]
rs2617970	0.81[ASN][1000 genomes]
rs2617971	0.95[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3101758	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4976536	0.94[AMR][1000 genomes]
rs4976569	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167526800-167552800	Weak transcription	Fetal Heart	heart
2	chr5:167532000-167544800	Weak transcription	Gastric	stomach
3	chr5:167532600-167542600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr5:167532600-167552800	Weak transcription	Right Ventricle	heart
5	chr5:167533600-167540000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
6	chr5:167533800-167559200	Weak transcription	NH-A	brain
7	chr5:167534000-167545200	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr5:167534200-167549600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr5:167537000-167544800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr5:167537000-167550800	Weak transcription	HSMM	muscle
11	chr5:167537800-167541400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr5:167537800-167545200	Weak transcription	H9 Cell Line	embryonic stem cell
13	chr5:167538400-167541400	Weak transcription	NHEK	skin
14	chr5:167538400-167544800	Weak transcription	Left Ventricle	heart
15	chr5:167538800-167542800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr5:167538800-167544600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr5:167538800-167544800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr5:167539400-167542800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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