Variant report

Variant	rs3101758
Chromosome Location	chr5:167536095-167536096
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:167534684..167536945-chr5:167537584..167539652,2	K562	blood:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1077046	0.87[CHD][hapmap]
rs1077047	0.83[CHB][hapmap]
rs11134488	0.81[ASN][1000 genomes]
rs12186726	0.87[CHD][hapmap]
rs12187313	0.83[CHD][hapmap]
rs12188893	0.87[CHD][hapmap]
rs1529681	0.83[CHD][hapmap]
rs1529684	0.83[CHD][hapmap]
rs1897558	0.95[CHD][hapmap]
rs2244626	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2337119	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.85[MEX][hapmap];0.88[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs2569036	0.84[CHD][hapmap]
rs2569040	0.95[CHD][hapmap];0.81[ASN][1000 genomes]
rs2569049	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];0.86[JPT][hapmap];0.92[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2617969	0.86[ASN][1000 genomes]
rs2617970	0.85[ASN][1000 genomes]
rs2617971	1.00[CEU][hapmap];0.88[CHB][hapmap];0.95[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs4404700	0.87[CHD][hapmap]
rs4976536	0.80[JPT][hapmap];0.94[MEX][hapmap];0.91[TSI][hapmap];0.94[AMR][1000 genomes]
rs4976569	0.87[CEU][hapmap];0.89[CHB][hapmap];0.94[MEX][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4976574	0.81[CHD][hapmap]
rs6885364	0.81[CHD][hapmap]
rs7708643	0.90[CHD][hapmap]
rs7712718	0.83[CHD][hapmap]
rs919738	0.83[CHD][hapmap]

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167516200-167538400	Weak transcription	HMEC	breast
2	chr5:167517400-167539400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr5:167526600-167536800	Weak transcription	Left Ventricle	heart
4	chr5:167526800-167552800	Weak transcription	Fetal Heart	heart
5	chr5:167532000-167544800	Weak transcription	Gastric	stomach
6	chr5:167532400-167536200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr5:167532600-167536800	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr5:167532600-167542600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr5:167532600-167552800	Weak transcription	Right Ventricle	heart
10	chr5:167532800-167536800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr5:167533200-167537400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr5:167533400-167537400	Weak transcription	Primary hematopoietic stem cells	blood
13	chr5:167533400-167537800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr5:167533400-167538000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
15	chr5:167533600-167536800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr5:167533600-167537200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
17	chr5:167533600-167540000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
18	chr5:167533800-167538200	Weak transcription	NHEK	skin
19	chr5:167533800-167559200	Weak transcription	NH-A	brain
20	chr5:167534000-167537200	Weak transcription	HUES48 Cell Line	embryonic stem cell
21	chr5:167534000-167537200	Weak transcription	HUES6 Cell Line	embryonic stem cell
22	chr5:167534000-167537400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr5:167534000-167545200	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr5:167534200-167536600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
25	chr5:167534200-167537800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
26	chr5:167534200-167549600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr5:167535000-167536600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr5:167535200-167538000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr5:167535800-167538200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr5:167536000-167536200	Enhancers	NHDF-Ad	bronchial
31	chr5:167536000-167537000	Enhancers	HSMM	muscle
32	chr5:167536000-167537800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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