Variant report

Variant	rs2337119
Chromosome Location	chr5:167536485-167536486
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:167534684..167536945-chr5:167537584..167539652,2	K562	blood:

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10036663	0.82[YRI][hapmap]
rs1077046	0.87[CHD][hapmap]
rs1077047	0.89[CHB][hapmap]
rs12186726	0.87[CHD][hapmap]
rs12187313	0.83[CHD][hapmap]
rs12188085	0.82[YRI][hapmap]
rs12188893	0.87[CHD][hapmap]
rs13358864	0.85[YRI][hapmap]
rs1529681	0.83[CHD][hapmap]
rs1529684	0.83[CHD][hapmap]
rs17051818	0.82[YRI][hapmap]
rs17051821	0.85[YRI][hapmap]
rs17069767	0.85[YRI][hapmap]
rs17069814	0.85[YRI][hapmap]
rs17069822	0.85[YRI][hapmap]
rs1897558	0.95[CHD][hapmap]
rs2244626	0.88[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2569036	0.84[CHD][hapmap]
rs2569040	0.84[CHB][hapmap];0.95[CHD][hapmap];0.82[JPT][hapmap];0.86[ASN][1000 genomes]
rs2569049	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];0.80[MEX][hapmap];0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2569052	0.84[CHB][hapmap]
rs2617969	0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2617970	0.90[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2617971	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.83[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs3101758	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.85[MEX][hapmap];0.88[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs4404700	0.87[CHD][hapmap]
rs4976536	0.80[MEX][hapmap];0.83[AMR][1000 genomes]
rs4976569	0.87[CEU][hapmap];0.82[CHB][hapmap];0.80[MEX][hapmap];0.82[AMR][1000 genomes]
rs4976574	0.81[CHD][hapmap]
rs6885364	0.81[CHD][hapmap]
rs7708643	0.90[CHD][hapmap]
rs7712718	0.83[CHD][hapmap]
rs7730804	1.00[YRI][hapmap]
rs919738	0.83[CHD][hapmap]
rs9313395	0.85[YRI][hapmap]

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167516200-167538400	Weak transcription	HMEC	breast
2	chr5:167517400-167539400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr5:167526600-167536800	Weak transcription	Left Ventricle	heart
4	chr5:167526800-167552800	Weak transcription	Fetal Heart	heart
5	chr5:167532000-167544800	Weak transcription	Gastric	stomach
6	chr5:167532600-167536800	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr5:167532600-167542600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr5:167532600-167552800	Weak transcription	Right Ventricle	heart
9	chr5:167532800-167536800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr5:167533200-167537400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr5:167533400-167537400	Weak transcription	Primary hematopoietic stem cells	blood
12	chr5:167533400-167537800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr5:167533400-167538000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
14	chr5:167533600-167536800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr5:167533600-167537200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
16	chr5:167533600-167540000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
17	chr5:167533800-167538200	Weak transcription	NHEK	skin
18	chr5:167533800-167559200	Weak transcription	NH-A	brain
19	chr5:167534000-167537200	Weak transcription	HUES48 Cell Line	embryonic stem cell
20	chr5:167534000-167537200	Weak transcription	HUES6 Cell Line	embryonic stem cell
21	chr5:167534000-167537400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr5:167534000-167545200	Weak transcription	H1 Cell Line	embryonic stem cell
23	chr5:167534200-167536600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr5:167534200-167537800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
25	chr5:167534200-167549600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr5:167535000-167536600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr5:167535200-167538000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr5:167535800-167538200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr5:167536000-167537000	Enhancers	HSMM	muscle
30	chr5:167536000-167537800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr5:167536200-167536600	Weak transcription	NHDF-Ad	bronchial
32	chr5:167536400-167536800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr5:167536400-167537000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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