Variant report

No.	Distal block	Cell Line	Cell type
1	chr5:167513289..167514132-chr5:167541216..167542021,2	MCF-7	breast:
2	chr5:167541391..167542060-chr5:167646403..167647190,2	MCF-7	breast:
3	chr5:167541464..167542017-chr5:167646588..167647367,2	K562	blood:
4	chr5:167541006..167542085-chr5:167646466..167647492,9	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1077047	0.83[CHB][hapmap];0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs11134488	0.90[ASN][1000 genomes]
rs13358864	0.83[YRI][hapmap]
rs17051821	0.83[YRI][hapmap]
rs17069767	0.82[YRI][hapmap]
rs17069814	0.82[YRI][hapmap]
rs17069822	0.83[YRI][hapmap]
rs1897558	0.80[JPT][hapmap];0.84[ASN][1000 genomes]
rs2244626	0.95[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2337119	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.83[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2569049	1.00[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];0.95[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2569052	0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs2617969	0.84[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs2617970	0.84[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs3101758	1.00[CEU][hapmap];0.88[CHB][hapmap];0.95[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs4246812	0.82[JPT][hapmap]
rs4976536	0.89[JPT][hapmap];0.89[AMR][1000 genomes]
rs4976569	0.85[CEU][hapmap];0.88[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4976573	0.81[JPT][hapmap];0.83[ASN][1000 genomes]
rs4976574	0.85[JPT][hapmap]
rs6555783	0.88[ASN][1000 genomes]
rs7730804	1.00[YRI][hapmap]
rs9313395	0.82[YRI][hapmap]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167526800-167552800	Weak transcription	Fetal Heart	heart
2	chr5:167532000-167544800	Weak transcription	Gastric	stomach
3	chr5:167532600-167542600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr5:167532600-167552800	Weak transcription	Right Ventricle	heart
5	chr5:167533800-167559200	Weak transcription	NH-A	brain
6	chr5:167534000-167545200	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr5:167534200-167549600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr5:167537000-167544800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr5:167537000-167550800	Weak transcription	HSMM	muscle
10	chr5:167537800-167545200	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr5:167538400-167544800	Weak transcription	Left Ventricle	heart
12	chr5:167538800-167542800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr5:167538800-167544600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr5:167538800-167544800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr5:167539400-167542800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr5:167540000-167544800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
17	chr5:167541400-167542000	Strong transcription	NHEK	skin
18	chr5:167541400-167550600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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