Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10082390	0.80[ASN][1000 genomes]
rs10828243	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11594201	0.85[ASN][1000 genomes]
rs11594724	0.80[ASN][1000 genomes]
rs12248483	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12776687	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34017213	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs58747541	0.80[ASN][1000 genomes]
rs6482181	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs67206878	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7067553	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7070904	0.82[EUR][1000 genomes]
rs7074328	0.81[ASN][1000 genomes]
rs7087431	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7895825	0.85[ASN][1000 genomes]
rs7899812	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7900593	0.85[ASN][1000 genomes]
rs7907233	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7922464	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs959652	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9664320	0.85[ASN][1000 genomes]
rs985520	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530148	chr10:21065080-21724565	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21691600-21699200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr10:21695200-21698800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr10:21696200-21697800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr10:21696800-21699400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr10:21697400-21698800	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr10:21697600-21706200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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