Variant report

Variant	rs9664320
Chromosome Location	chr10:21739822-21739823
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:21738096..21741227-chr10:21742837..21745484,3	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10047291	0.93[AFR][1000 genomes];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10047346	0.85[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs10082390	0.87[AFR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10828243	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11012716	0.91[EUR][1000 genomes]
rs11012717	0.91[EUR][1000 genomes]
rs11592490	0.84[ASN][1000 genomes]
rs11592976	0.84[ASN][1000 genomes]
rs11594201	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11594724	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11596452	0.87[ASN][1000 genomes]
rs12248483	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12249704	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12776687	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs16921815	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2360051	0.85[ASN][1000 genomes]
rs34017213	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34449603	0.90[EUR][1000 genomes]
rs58747541	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6482181	0.94[CEU][hapmap];1.00[CHB][hapmap];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs66491474	0.84[ASN][1000 genomes]
rs67206878	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs67332292	0.82[ASN][1000 genomes]
rs7067553	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7070904	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7074328	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7080252	0.86[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs7087431	0.82[ASN][1000 genomes]
rs7098776	0.91[EUR][1000 genomes]
rs72794816	0.84[ASN][1000 genomes]
rs7895825	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7899812	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7900593	0.91[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7912634	0.88[EUR][1000 genomes]
rs7922464	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs959652	0.94[CEU][hapmap];1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825284	chr10:21739527-21847437	Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21738600-21762000	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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