Variant report

Variant	rs7899812
Chromosome Location	chr10:21725452-21725453
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:21709922..21712770-chr10:21723710..21728356,4	K562	blood:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10047291	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10047346	0.80[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs10082390	0.80[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10828243	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11012716	0.87[EUR][1000 genomes]
rs11012717	0.87[EUR][1000 genomes]
rs11594201	0.83[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11594724	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11596452	0.83[ASN][1000 genomes]
rs12248483	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12249704	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12412917	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12776687	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16921815	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2360051	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs34017213	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34449603	0.86[EUR][1000 genomes]
rs58747541	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6482181	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs67206878	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7067553	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7070904	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7074328	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7080252	0.89[EUR][1000 genomes]
rs7087431	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7098776	0.87[EUR][1000 genomes]
rs7895825	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7900593	0.89[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7907233	0.81[EUR][1000 genomes]
rs7912634	0.84[EUR][1000 genomes]
rs7922464	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs959652	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];0.93[MEX][hapmap];0.97[TSI][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9664320	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:21724800-21726600	Weak transcription	Placenta	Placenta
2	chr10:21725400-21730200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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