Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:50336001..50338824-chr10:50401214..50403716,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10776544	0.88[ASN][1000 genomes]
rs10857438	0.98[ASN][1000 genomes]
rs10857439	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10857441	0.83[ASN][1000 genomes]
rs11101006	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11101015	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11101016	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12570293	0.96[ASN][1000 genomes]
rs12768927	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17009325	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17701363	0.86[ASN][1000 genomes]
rs1962336	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2377949	0.91[ASN][1000 genomes]
rs2377994	0.97[ASN][1000 genomes]
rs2377995	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2377996	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55908723	0.86[ASN][1000 genomes]
rs61848458	0.86[ASN][1000 genomes]
rs6537507	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7082074	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7094833	0.91[ASN][1000 genomes]
rs7475519	0.97[ASN][1000 genomes]
rs7919144	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895375	chr10:50306386-51028871	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
2	nsv534410	chr10:50317458-50826916	Weak transcription Bivalent Enhancer Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:50398600-50403400	Weak transcription	Spleen	Spleen
2	chr10:50399200-50404600	Weak transcription	K562	blood
3	chr10:50401400-50403600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
4	chr10:50401800-50403200	Enhancers	Primary B cells from peripheral blood	blood
5	chr10:50401800-50403400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
6	chr10:50402000-50402800	Flanking Active TSS	HUVEC	blood vessel
7	chr10:50402200-50402800	Enhancers	Primary B cells from cord blood	blood
8	chr10:50402400-50402800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr10:50402400-50403400	Enhancers	Primary neutrophils fromperipheralblood	blood
10	chr10:50402400-50403600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
11	chr10:50402600-50402800	Enhancers	Right Atrium	heart
12	chr10:50402600-50403000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood

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