The 2.0 version of rSNPBase

Variant report

Variant rs2497667
Chromosome Location chr10:116369155-116369156
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116345000-116382400 Weak transcription HSMM muscle
2 chr10:116354800-116378600 Weak transcription Fetal Stomach stomach
3 chr10:116355400-116371000 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr10:116360600-116370600 Weak transcription Lung lung
5 chr10:116360600-116380600 Weak transcription Primary hematopoietic stem cells blood
6 chr10:116361400-116379000 Weak transcription Fetal Muscle Trunk muscle
7 chr10:116361600-116378200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr10:116365000-116371400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr10:116365000-116372400 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr10:116365000-116382400 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr10:116365200-116371600 Weak transcription Brain Cingulate Gyrus brain
12 chr10:116365200-116371800 Weak transcription Duodenum Mucosa Duodenum
13 chr10:116365200-116373600 Weak transcription Stomach Smooth Muscle stomach
14 chr10:116365400-116369800 Weak transcription Brain Angular Gyrus brain
15 chr10:116365400-116372400 Weak transcription Small Intestine intestine
16 chr10:116365400-116380600 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr10:116365400-116382400 Weak transcription Brain Hippocampus Middle brain
18 chr10:116365600-116369800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr10:116365600-116375000 Weak transcription Brain Inferior Temporal Lobe brain
20 chr10:116365600-116378400 Weak transcription Aorta Aorta
21 chr10:116365800-116369800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr10:116365800-116370000 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr10:116365800-116371200 Weak transcription Hela-S3 cervix
24 chr10:116365800-116371600 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr10:116365800-116371600 Weak transcription Brain Anterior Caudate brain
26 chr10:116365800-116371800 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr10:116365800-116378400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr10:116365800-116382000 Weak transcription Gastric stomach
29 chr10:116366000-116371200 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr10:116366000-116371400 Weak transcription HepG2 liver
31 chr10:116366600-116369800 Weak transcription Psoas Muscle Psoas
32 chr10:116366600-116371600 Weak transcription Esophagus oesophagus
33 chr10:116366600-116371800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr10:116366600-116373200 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr10:116366800-116370200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr10:116367200-116369600 Weak transcription Right Ventricle heart
37 chr10:116367600-116369600 Weak transcription Fetal Heart heart
38 chr10:116367600-116370000 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr10:116367600-116371000 Weak transcription Stomach Mucosa stomach
40 chr10:116367800-116371200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr10:116367800-116371200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr10:116367800-116371200 Weak transcription A549 lung
43 chr10:116367800-116371200 Weak transcription HMEC breast
44 chr10:116367800-116371400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr10:116367800-116382600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr10:116368200-116371200 Weak transcription Adipose Nuclei Adipose
47 chr10:116368200-116373400 Weak transcription Pancreas Pancrea
48 chr10:116368600-116369200 Enhancers Sigmoid Colon Sigmoid Colon
49 chr10:116368600-116376400 Enhancers Liver Liver
50 chr10:116368600-116376400 Enhancers Right Atrium heart

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Last update: Aug 31, 2015