Variant report

Variant	rs11817337
Chromosome Location	chr10:116498051-116498052
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs11814078	1.00[ASN][1000 genomes]
rs11816826	1.00[ASN][1000 genomes]
rs11817330	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1413196	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17092260	1.00[ASN][1000 genomes]
rs17092288	1.00[ASN][1000 genomes]
rs17092299	1.00[ASN][1000 genomes]
rs17092337	1.00[ASN][1000 genomes]
rs2483589	1.00[ASN][1000 genomes]
rs2497666	1.00[ASN][1000 genomes]
rs2497667	1.00[ASN][1000 genomes]
rs56044402	1.00[ASN][1000 genomes]
rs59738549	1.00[ASN][1000 genomes]
rs60460075	1.00[ASN][1000 genomes]
rs60870849	1.00[ASN][1000 genomes]
rs61669564	1.00[ASN][1000 genomes]
rs61867889	1.00[ASN][1000 genomes]
rs61867917	1.00[ASN][1000 genomes]
rs61867918	1.00[ASN][1000 genomes]
rs61867919	1.00[ASN][1000 genomes]
rs61867923	1.00[ASN][1000 genomes]
rs61867924	1.00[ASN][1000 genomes]
rs61867925	1.00[ASN][1000 genomes]
rs61867929	1.00[ASN][1000 genomes]
rs61867933	1.00[ASN][1000 genomes]
rs61869065	1.00[ASN][1000 genomes]
rs61869066	1.00[ASN][1000 genomes]
rs61869068	1.00[ASN][1000 genomes]
rs61869069	1.00[ASN][1000 genomes]
rs61869071	1.00[ASN][1000 genomes]
rs7070890	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7084277	1.00[ASN][1000 genomes]
rs73363911	1.00[ASN][1000 genomes]
rs74158064	1.00[ASN][1000 genomes]
rs74158066	1.00[ASN][1000 genomes]
rs74158068	1.00[ASN][1000 genomes]
rs74158070	1.00[ASN][1000 genomes]
rs74158071	1.00[ASN][1000 genomes]
rs74158072	1.00[ASN][1000 genomes]
rs74158073	1.00[ASN][1000 genomes]
rs74158075	1.00[ASN][1000 genomes]
rs74158076	1.00[ASN][1000 genomes]
rs74158079	1.00[ASN][1000 genomes]
rs74158081	1.00[ASN][1000 genomes]
rs74158083	1.00[ASN][1000 genomes]
rs7914325	1.00[ASN][1000 genomes]
rs7915853	1.00[ASN][1000 genomes]
rs808331	0.90[AFR][1000 genomes]
rs808349	0.90[AFR][1000 genomes]
rs9421195	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1037308	chr10:116141946-116519765	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	nsv540780	chr10:116141946-116519765	Enhancers Genic enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
3	nsv949138	chr10:116311531-116874477	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
4	nsv1038050	chr10:116315109-116895719	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
5	nsv533027	chr10:116344641-116856352	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
6	esv3435429	chr10:116394152-117006347	Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
7	nsv1042170	chr10:116455043-116504871	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
8	nsv1046888	chr10:116455043-116505640	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:116486800-116514600	Weak transcription	Pancreas	Pancrea
2	chr10:116494400-116508200	Weak transcription	Right Atrium	heart
3	chr10:116494800-116503000	Weak transcription	Fetal Heart	heart
4	chr10:116496800-116498200	Enhancers	Left Ventricle	heart
5	chr10:116497400-116507000	Weak transcription	Right Ventricle	heart

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