The 2.0 version of rSNPBase

Variant report

Variant rs61867933
Chromosome Location chr10:116412310-116412311
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116394400-116422600 Weak transcription Fetal Intestine Small intestine
2 chr10:116399800-116413800 Weak transcription Spleen Spleen
3 chr10:116405200-116413400 Weak transcription Colonic Mucosa Colon
4 chr10:116406200-116412800 Weak transcription Brain Cingulate Gyrus brain
5 chr10:116406200-116422000 Weak transcription Fetal Lung lung
6 chr10:116408200-116412800 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr10:116408400-116415600 Enhancers HUVEC blood vessel
8 chr10:116408600-116413600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr10:116408600-116422000 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr10:116408600-116441400 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr10:116408800-116413000 Weak transcription Psoas Muscle Psoas
12 chr10:116408800-116427400 Weak transcription Primary hematopoietic stem cells blood
13 chr10:116409000-116414600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr10:116409400-116414200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr10:116409600-116413400 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr10:116409600-116414200 Weak transcription NHEK skin
17 chr10:116409600-116414400 Weak transcription Placenta Placenta
18 chr10:116409600-116414400 Weak transcription Hela-S3 cervix
19 chr10:116409600-116421200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr10:116409600-116423600 Weak transcription Esophagus oesophagus
21 chr10:116410200-116412800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr10:116410200-116414400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr10:116410200-116414600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr10:116410200-116414800 Weak transcription HSMMtube muscle
25 chr10:116410400-116414400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr10:116410800-116412400 Weak transcription Stomach Mucosa stomach
27 chr10:116410800-116413800 Enhancers Liver Liver
28 chr10:116410800-116422000 Weak transcription Brain Hippocampus Middle brain
29 chr10:116411000-116412600 Weak transcription A549 lung
30 chr10:116411000-116415800 Enhancers Right Ventricle heart
31 chr10:116411000-116417400 Enhancers Right Atrium heart
32 chr10:116411200-116412800 Weak transcription Gastric stomach
33 chr10:116411200-116413600 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr10:116411400-116414400 Weak transcription HepG2 liver
35 chr10:116411400-116415800 Enhancers Skeletal Muscle Male skeletal muscle
36 chr10:116411400-116418800 Enhancers Fetal Heart heart
37 chr10:116411600-116415200 Enhancers Adipose Nuclei Adipose
38 chr10:116411800-116412800 Weak transcription Left Ventricle heart
39 chr10:116411800-116412800 Weak transcription Pancreas Pancrea
40 chr10:116412200-116412400 Enhancers Ovary ovary
41 chr10:116412200-116412600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr10:116412200-116414000 Enhancers Brain Anterior Caudate brain
43 chr10:116412200-116414800 Enhancers Sigmoid Colon Sigmoid Colon
44 chr10:116412200-116415600 Enhancers Rectal Mucosa Donor 31 rectum
45 chr10:116412200-116415800 Enhancers Lung lung

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Last update: Aug 31, 2015