The 2.0 version of rSNPBase

Variant report

Variant rs7915853
Chromosome Location chr10:116387312-116387313
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116378800-116391200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr10:116382400-116387400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr10:116382400-116387600 Enhancers HMEC breast
4 chr10:116382400-116387800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr10:116382400-116388000 Enhancers Skeletal Muscle Female skeletal muscle
6 chr10:116382600-116387600 Enhancers NHEK skin
7 chr10:116383200-116391200 Weak transcription Lung lung
8 chr10:116383400-116388800 Weak transcription Fetal Intestine Large intestine
9 chr10:116384000-116388800 Weak transcription Psoas Muscle Psoas
10 chr10:116384000-116391000 Weak transcription Fetal Intestine Small intestine
11 chr10:116384200-116390800 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr10:116384400-116388600 Weak transcription Liver Liver
13 chr10:116384400-116389200 Weak transcription Esophagus oesophagus
14 chr10:116384400-116389600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr10:116384400-116390200 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr10:116384400-116390400 Weak transcription Stomach Smooth Muscle stomach
17 chr10:116385000-116390400 Weak transcription HUVEC blood vessel
18 chr10:116385200-116391000 Weak transcription Stomach Mucosa stomach
19 chr10:116385200-116391200 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr10:116385400-116387600 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr10:116385400-116388800 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr10:116385400-116389600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr10:116385400-116390800 Weak transcription Primary hematopoietic stem cells blood
24 chr10:116385400-116391000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr10:116385600-116389200 Weak transcription HepG2 liver
26 chr10:116385600-116389400 Weak transcription Hela-S3 cervix
27 chr10:116385600-116389600 Weak transcription A549 lung
28 chr10:116385600-116390200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr10:116385600-116390800 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr10:116385800-116388800 Enhancers Fetal Heart heart
31 chr10:116386200-116391000 Weak transcription Gastric stomach
32 chr10:116386800-116387400 Enhancers HSMMtube muscle
33 chr10:116386800-116387800 Weak transcription Left Ventricle heart
34 chr10:116386800-116388000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr10:116386800-116388600 Weak transcription Right Atrium heart
36 chr10:116386800-116389000 Weak transcription Pancreas Pancrea
37 chr10:116386800-116389200 Enhancers Pancreatic Islets Pancreatic Islet
38 chr10:116386800-116389400 Weak transcription Adipose Nuclei Adipose
39 chr10:116386800-116391000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr10:116387000-116387800 Weak transcription Placenta Amnion Placenta Amnion
41 chr10:116387000-116388200 Weak transcription NH-A brain
42 chr10:116387200-116387400 Enhancers Right Ventricle heart
43 chr10:116387200-116389000 Weak transcription Fetal Muscle Leg muscle
44 chr10:116387200-116389200 Weak transcription Colon Smooth Muscle Colon
45 chr10:116387200-116389400 Weak transcription HSMM muscle
46 chr10:116387200-116389600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015