The 2.0 version of rSNPBase

Variant report

Variant rs61867889
Chromosome Location chr10:116366140-116366141
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116345000-116382400 Weak transcription HSMM muscle
2 chr10:116352600-116367600 Weak transcription Ovary ovary
3 chr10:116354800-116378600 Weak transcription Fetal Stomach stomach
4 chr10:116355400-116371000 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr10:116359200-116366600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr10:116360600-116370600 Weak transcription Lung lung
7 chr10:116360600-116380600 Weak transcription Primary hematopoietic stem cells blood
8 chr10:116361400-116379000 Weak transcription Fetal Muscle Trunk muscle
9 chr10:116361600-116378200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr10:116362600-116367600 Enhancers Stomach Mucosa stomach
11 chr10:116364000-116366600 Enhancers Fetal Kidney kidney
12 chr10:116364000-116368200 Enhancers Adipose Nuclei Adipose
13 chr10:116364200-116366600 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr10:116364200-116367200 Enhancers Left Ventricle heart
15 chr10:116364600-116366800 Enhancers Right Atrium heart
16 chr10:116364600-116367000 Enhancers Liver Liver
17 chr10:116364600-116367200 Enhancers Right Ventricle heart
18 chr10:116365000-116367200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr10:116365000-116367200 Weak transcription HUVEC blood vessel
20 chr10:116365000-116367600 Enhancers Fetal Heart heart
21 chr10:116365000-116371400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr10:116365000-116372400 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr10:116365000-116382400 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr10:116365200-116367600 Enhancers Pancreas Pancrea
25 chr10:116365200-116371600 Weak transcription Brain Cingulate Gyrus brain
26 chr10:116365200-116371800 Weak transcription Duodenum Mucosa Duodenum
27 chr10:116365200-116373600 Weak transcription Stomach Smooth Muscle stomach
28 chr10:116365400-116366200 Weak transcription Psoas Muscle Psoas
29 chr10:116365400-116366400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr10:116365400-116369800 Weak transcription Brain Angular Gyrus brain
31 chr10:116365400-116372400 Weak transcription Small Intestine intestine
32 chr10:116365400-116380600 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr10:116365400-116382400 Weak transcription Brain Hippocampus Middle brain
34 chr10:116365600-116366600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr10:116365600-116367200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr10:116365600-116369800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr10:116365600-116375000 Weak transcription Brain Inferior Temporal Lobe brain
38 chr10:116365600-116378400 Weak transcription Aorta Aorta
39 chr10:116365800-116367200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr10:116365800-116367200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr10:116365800-116367200 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr10:116365800-116369000 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr10:116365800-116369800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr10:116365800-116370000 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr10:116365800-116371200 Weak transcription Hela-S3 cervix
46 chr10:116365800-116371600 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr10:116365800-116371600 Weak transcription Brain Anterior Caudate brain
48 chr10:116365800-116371800 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr10:116365800-116378400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr10:116365800-116382000 Weak transcription Gastric stomach

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Last update: Aug 31, 2015