Variant report

No.	Distal block	Cell Line	Cell type
1	chr10:44804868..44806553-chr10:44814577..44816220,2	MCF-7	breast:
2	chr10:44811931..44814471-chr10:44815222..44820050,4	MCF-7	breast:
3	chr10:44811973..44813538-chr10:44814661..44817151,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11238983	1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs1144484	0.87[TSI][hapmap]
rs12265086	0.86[ASN][1000 genomes]
rs12265306	0.86[ASN][1000 genomes]
rs17156166	1.00[JPT][hapmap]
rs1836982	0.87[TSI][hapmap]
rs1898317	0.82[EUR][1000 genomes]
rs2146807	0.83[MEX][hapmap]
rs2457481	0.83[EUR][1000 genomes]
rs2476351	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2505737	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2505738	0.97[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs2505739	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2505740	0.89[MEX][hapmap];0.97[TSI][hapmap];0.86[EUR][1000 genomes]
rs2505743	0.83[EUR][1000 genomes]
rs4491167	1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs61856381	0.86[ASN][1000 genomes]
rs7913265	0.86[ASN][1000 genomes]
rs7914042	0.86[ASN][1000 genomes]
rs800310	0.81[CEU][hapmap];0.82[CHB][hapmap];0.85[CHD][hapmap];1.00[JPT][hapmap];0.85[TSI][hapmap];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs800331	0.86[ASN][1000 genomes]
rs977754	0.84[ASW][hapmap];0.94[MEX][hapmap];0.82[MKK][hapmap];0.97[TSI][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1038511	chr10:44596885-44870030	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44806600-44820800	Weak transcription	Right Atrium	heart
2	chr10:44807200-44822200	Weak transcription	Left Ventricle	heart
3	chr10:44807600-44820800	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr10:44808000-44820000	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr10:44812800-44817200	Weak transcription	Placenta	Placenta
6	chr10:44815600-44816600	Enhancers	Fetal Heart	heart

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