The 2.0 version of rSNPBase

Variant report

Variant rs2509017
Chromosome Location chr11:102471505-102471506
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:102466800-102474200 Enhancers HepG2 liver
2 chr11:102469000-102471600 Enhancers Fetal Intestine Large intestine
3 chr11:102469200-102471600 Enhancers NHDF-Ad bronchial
4 chr11:102469200-102471800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr11:102469200-102471800 Enhancers Stomach Mucosa stomach
6 chr11:102469200-102475800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr11:102469200-102476200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr11:102469400-102471600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr11:102469400-102471600 Enhancers Fetal Adrenal Gland Adrenal Gland
10 chr11:102469400-102471800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
11 chr11:102469400-102473400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr11:102469800-102474400 Weak transcription Pancreas Pancrea
13 chr11:102470000-102472400 Enhancers HSMMtube muscle
14 chr11:102470000-102476000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr11:102470200-102472400 Enhancers Cortex derived primary cultured neurospheres brain
16 chr11:102470800-102472400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr11:102470800-102475200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr11:102470800-102476000 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr11:102471000-102471600 Enhancers Hela-S3 cervix
20 chr11:102471000-102471600 Enhancers HUVEC blood vessel
21 chr11:102471000-102471600 Enhancers NHLF lung
22 chr11:102471000-102471800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr11:102471000-102471800 Enhancers NHEK skin
24 chr11:102471000-102471800 Enhancers Osteobl bone
25 chr11:102471000-102472000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr11:102471000-102472400 Weak transcription Brain Anterior Caudate brain
27 chr11:102471000-102472400 Weak transcription Brain Hippocampus Middle brain
28 chr11:102471000-102472600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
29 chr11:102471000-102473600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr11:102471000-102473800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr11:102471000-102473800 Weak transcription GM12878-XiMat blood
32 chr11:102471000-102474000 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr11:102471000-102474000 Enhancers HSMM muscle
34 chr11:102471000-102474200 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr11:102471000-102476200 Enhancers HMEC breast
36 chr11:102471200-102471600 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr11:102471200-102471600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr11:102471200-102471800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr11:102471200-102471800 Enhancers Muscle Satellite Cultured Cells --
40 chr11:102471200-102471800 Enhancers Placenta Placenta
41 chr11:102471200-102472400 Enhancers A549 lung
42 chr11:102471200-102474000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr11:102471200-102475000 Enhancers NH-A brain
44 chr11:102471400-102471600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr11:102471400-102471600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015