Variant report

Variant	rs253712
Chromosome Location	chr5:94702182-94702183
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10061291	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1162861	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1363428	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1363429	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs181880	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1820041	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs185249	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1895248	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1895249	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2194089	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2348407	0.85[ASN][1000 genomes]
rs2432174	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2434250	0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs2434251	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs253708	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs253719	0.87[AMR][1000 genomes]
rs2546097	0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2546102	0.93[ASN][1000 genomes]
rs2546103	0.93[ASN][1000 genomes]
rs2546104	0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2560278	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2731834	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2731835	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2731837	0.93[ASN][1000 genomes]
rs33365	0.85[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs33366	0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs33367	0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs33892	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs33893	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs41121	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94701400-94702200	Enhancers	HUES6 Cell Line	embryonic stem cell
2	chr5:94701400-94705000	Weak transcription	Fetal Thymus	thymus

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