Variant report

Variant	rs41121
Chromosome Location	chr5:94730340-94730341
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:94722569..94724936-chr5:94728668..94731234,2	K562	blood:
2	chr5:94724669..94726342-chr5:94730028..94732771,2	K562	blood:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10061291	0.83[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs1363428	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1363429	0.83[EUR][1000 genomes]
rs181880	1.00[CEU][hapmap];0.92[CHB][hapmap];0.96[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.97[TSI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1820041	0.85[ASN][1000 genomes]
rs185249	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1895248	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1895249	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2194089	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2432174	0.89[ASN][1000 genomes]
rs2434251	0.83[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs253708	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs253712	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs253719	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2546097	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2546099	0.81[ASN][1000 genomes]
rs2546102	0.89[ASN][1000 genomes]
rs2546103	0.89[ASN][1000 genomes]
rs2546104	0.88[ASN][1000 genomes]
rs2560278	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs26393	0.87[JPT][hapmap]
rs26394	0.87[JPT][hapmap]
rs26395	0.87[JPT][hapmap]
rs2731834	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2731835	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2731837	0.89[ASN][1000 genomes]
rs27767	0.87[JPT][hapmap]
rs33811	0.87[JPT][hapmap]
rs33892	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs33893	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94728200-94730400	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr5:94728200-94730400	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr5:94729200-94737600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr5:94730000-94730400	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr5:94730000-94730600	Enhancers	H9 Cell Line	embryonic stem cell
6	chr5:94730000-94730600	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr5:94730000-94730600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr5:94730200-94730600	Enhancers	H1 Cell Line	embryonic stem cell

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