Variant report

Variant	rs2560278
Chromosome Location	chr5:94715142-94715143
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10061291	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1162861	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1363428	0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1363429	0.80[EUR][1000 genomes]
rs181880	0.84[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs1820041	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs185249	0.93[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1895248	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1895249	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2194089	0.97[ASN][1000 genomes]
rs2348407	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2432174	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2434250	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2434251	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs253708	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs253712	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs253719	0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2546097	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2546099	0.82[EUR][1000 genomes]
rs2546102	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2546103	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2546104	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2731834	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs2731835	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2731837	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs33365	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs33366	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs33367	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs33892	0.83[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs33893	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs41121	0.84[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94711600-94715600	Weak transcription	Fetal Thymus	thymus

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