Variant report

Variant	rs33892
Chromosome Location	chr5:94728078-94728079
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10061291	0.87[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs1162861	0.81[AMR][1000 genomes]
rs13360706	0.83[YRI][hapmap]
rs1363428	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1363429	0.83[EUR][1000 genomes]
rs181880	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1820041	0.85[ASN][1000 genomes]
rs185249	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1895248	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1895249	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2194089	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2432174	0.89[ASN][1000 genomes]
rs2434251	0.87[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs253708	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs253712	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs253719	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2546097	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2546099	0.81[ASN][1000 genomes]
rs2546102	0.89[ASN][1000 genomes]
rs2546103	0.89[ASN][1000 genomes]
rs2546104	0.88[ASN][1000 genomes]
rs2560278	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs26393	0.86[JPT][hapmap]
rs26394	0.86[JPT][hapmap]
rs26395	0.85[JPT][hapmap]
rs2731834	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2731835	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2731837	0.89[ASN][1000 genomes]
rs27767	0.86[JPT][hapmap]
rs33811	0.85[JPT][hapmap]
rs33893	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41121	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94727000-94728400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr5:94728000-94729200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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