Variant report

Variant	rs2576810
Chromosome Location	chr2:209332455-209332456
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr2:209332410-209332571	K562	blood:	n/a	n/a
2	CEBPB	chr2:209332311-209332650	H1-hESC	embryonic stem cell:	n/a	n/a

Variant related genes	Relation type
ENSG00000227430	TF binding region
ENSG00000231896	TF binding region

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10202607	0.86[JPT][hapmap]
rs1057392	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1259698	0.85[ASN][1000 genomes]
rs12617462	0.91[CHB][hapmap];1.00[YRI][hapmap]
rs1370376	0.85[CEU][hapmap];0.88[CHB][hapmap];1.00[YRI][hapmap]
rs1377907	0.82[JPT][hapmap]
rs1437418	0.82[JPT][hapmap]
rs1816613	0.82[JPT][hapmap]
rs2059963	0.82[JPT][hapmap]
rs2061013	0.82[JPT][hapmap]
rs2364126	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2364127	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2364128	0.87[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2924790	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34242215	0.82[EUR][1000 genomes]
rs34845288	0.85[ASN][1000 genomes]
rs3769516	0.81[JPT][hapmap]
rs3769517	0.81[CHD][hapmap];0.82[JPT][hapmap]
rs3820900	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3820902	0.83[CHD][hapmap];0.82[JPT][hapmap]
rs3820904	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4627502	0.87[CEU][hapmap];0.86[CHB][hapmap];0.81[JPT][hapmap];1.00[YRI][hapmap]
rs4675769	0.82[JPT][hapmap]
rs4675770	0.82[JPT][hapmap]
rs4675772	0.80[JPT][hapmap]
rs6435464	0.82[JPT][hapmap]
rs6726003	0.82[JPT][hapmap]
rs6755377	0.82[JPT][hapmap]
rs879707	0.83[CHD][hapmap];0.86[JPT][hapmap];0.81[ASN][1000 genomes]
rs897082	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs897083	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs897084	1.00[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:209331000-209333000	Enhancers	Fetal Lung	lung
2	chr2:209331200-209333200	Weak transcription	Aorta	Aorta
3	chr2:209331400-209342000	Weak transcription	Pancreas	Pancrea
4	chr2:209332200-209333400	Enhancers	Ovary	ovary

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