Variant report

Variant rs2590390
Chromosome Location chr10:49607440-49607441
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:49593200-49607600 Weak transcription Fetal Lung lung
2 chr10:49595000-49616000 Weak transcription Primary B cells from cord blood blood
3 chr10:49598600-49619800 Weak transcription Fetal Intestine Small intestine
4 chr10:49598800-49612800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr10:49599200-49608200 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr10:49599200-49622200 Weak transcription HepG2 liver
7 chr10:49599800-49618000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr10:49600000-49612400 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr10:49600000-49613400 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr10:49600000-49613600 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr10:49600000-49618600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr10:49600200-49612400 Weak transcription Primary T cells fromperipheralblood blood
13 chr10:49600200-49617400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr10:49600200-49618200 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr10:49600400-49608000 Weak transcription Small Intestine intestine
16 chr10:49600400-49616800 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr10:49600400-49620200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr10:49601200-49613800 Weak transcription Primary T cells from cord blood blood
19 chr10:49604200-49608200 Weak transcription Primary hematopoietic stem cells blood
20 chr10:49604200-49609200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr10:49605200-49618000 Weak transcription Fetal Muscle Leg muscle
22 chr10:49606000-49607600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
23 chr10:49606000-49608200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr10:49606000-49609000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
25 chr10:49606200-49608200 Enhancers Colon Smooth Muscle Colon
26 chr10:49606200-49608800 Enhancers Skeletal Muscle Male skeletal muscle
27 chr10:49606200-49609200 Enhancers Brain Anterior Caudate brain
28 chr10:49606200-49609200 Enhancers HSMMtube muscle
29 chr10:49606200-49609400 Enhancers HUES64 Cell Line embryonic stem cell
30 chr10:49606200-49609400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr10:49606200-49609800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
32 chr10:49606200-49609800 Enhancers Brain Angular Gyrus brain
33 chr10:49606400-49608000 Enhancers H9 Cell Line embryonic stem cell
34 chr10:49606400-49608000 Enhancers Brain Germinal Matrix brain
35 chr10:49606400-49608200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
36 chr10:49606400-49609200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr10:49606400-49609200 Enhancers HUES48 Cell Line embryonic stem cell
38 chr10:49606400-49609200 Enhancers iPS-15b Cell Line embryonic stem cell
39 chr10:49606400-49609200 Enhancers Cortex derived primary cultured neurospheres brain
40 chr10:49606400-49609200 Enhancers Brain Inferior Temporal Lobe brain
41 chr10:49606400-49609200 Enhancers K562 blood
42 chr10:49606600-49607600 Enhancers Fetal Brain Female brain
43 chr10:49606600-49608200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
44 chr10:49606600-49609200 Enhancers H1 Cell Line embryonic stem cell
45 chr10:49606600-49609400 Enhancers Fetal Brain Male brain
46 chr10:49606800-49607600 Enhancers Skeletal Muscle Female skeletal muscle
47 chr10:49606800-49608000 Enhancers Placenta Amnion Placenta Amnion
48 chr10:49606800-49608200 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr10:49606800-49609000 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr10:49606800-49609200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

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