Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10763038	0.83[CHD][hapmap]
rs11003964	0.92[CHB][hapmap]
rs11003968	0.90[CHB][hapmap];0.94[CHD][hapmap];0.95[GIH][hapmap];0.85[JPT][hapmap];0.88[TSI][hapmap];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11003977	0.92[CHB][hapmap];0.94[CHD][hapmap];0.95[GIH][hapmap];0.85[JPT][hapmap];0.88[TSI][hapmap]
rs11003996	1.00[CHB][hapmap];0.95[ASN][1000 genomes]
rs11003999	1.00[CHB][hapmap];0.90[GIH][hapmap];0.85[JPT][hapmap]
rs12572470	0.84[GIH][hapmap]
rs1900458	0.83[CHD][hapmap]
rs1911429	0.83[CHD][hapmap]
rs2121525	0.83[CHD][hapmap]
rs2253198	0.92[CHB][hapmap];0.93[ASN][1000 genomes]
rs2253647	0.92[CHB][hapmap];0.85[JPT][hapmap]
rs2384343	0.83[CHD][hapmap]
rs2593135	0.83[CHD][hapmap]
rs2610884	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2610885	0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs2610891	0.95[GIH][hapmap];0.88[TSI][hapmap]
rs2610899	0.84[CHB][hapmap]
rs2610902	0.83[CHB][hapmap]
rs2660147	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2660149	1.00[GIH][hapmap];0.88[TSI][hapmap]
rs2660180	0.84[CHB][hapmap];0.83[CHD][hapmap];0.90[GIH][hapmap];0.85[JPT][hapmap];0.88[TSI][hapmap];0.90[ASN][1000 genomes]
rs2660183	0.83[CHD][hapmap]
rs2660184	0.83[CHD][hapmap]
rs2660190	0.83[CHB][hapmap]
rs2926405	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2926406	0.90[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7358220	0.92[CHB][hapmap];0.85[JPT][hapmap]
rs9651342	1.00[CHB][hapmap];0.85[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949692	chr10:55502542-55893206	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv869303	chr10:55714219-55857931	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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