Variant report

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10763039	0.94[CEU][hapmap]
rs10763043	0.89[CEU][hapmap]
rs10825183	0.84[CEU][hapmap]
rs10825184	0.94[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10825190	0.89[CEU][hapmap]
rs10825203	0.85[TSI][hapmap]
rs10825218	0.82[TSI][hapmap]
rs11003982	0.89[CEU][hapmap]
rs11003983	0.89[CEU][hapmap]
rs11003997	0.89[CEU][hapmap]
rs12415408	0.89[CEU][hapmap]
rs16937849	0.94[CEU][hapmap];0.80[EUR][1000 genomes]
rs1911390	0.85[TSI][hapmap]
rs1911397	0.87[TSI][hapmap]
rs1911409	0.84[TSI][hapmap]
rs1911410	0.89[CEU][hapmap]
rs1911412	0.89[CEU][hapmap]
rs1911413	0.89[CEU][hapmap]
rs1911414	0.89[CEU][hapmap];0.94[CHB][hapmap]
rs1911419	0.89[CEU][hapmap]
rs2135720	0.89[CEU][hapmap]
rs2135721	0.84[CEU][hapmap]
rs2135723	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs2926404	0.82[CHB][hapmap];0.94[JPT][hapmap]
rs3812658	0.91[TSI][hapmap]
rs4245026	0.89[CEU][hapmap]
rs4935480	0.94[CEU][hapmap];0.80[EUR][1000 genomes]
rs4935481	0.94[CEU][hapmap];0.80[EUR][1000 genomes]
rs4935482	0.89[CEU][hapmap]
rs6481053	0.89[CEU][hapmap]
rs7079497	0.89[CEU][hapmap]
rs7094237	0.94[CEU][hapmap];0.81[MEX][hapmap];0.80[EUR][1000 genomes]
rs7900452	0.89[CEU][hapmap]
rs7911734	0.91[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949692	chr10:55502542-55893206	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1052939	chr10:55654719-55769239	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv869303	chr10:55714219-55857931	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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