Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10825196	1.00[CEU][hapmap]
rs10825197	0.95[CEU][hapmap]
rs10825198	1.00[CEU][hapmap]
rs10825203	0.95[CEU][hapmap];0.98[GIH][hapmap];0.83[MEX][hapmap];0.88[TSI][hapmap]
rs10825207	0.81[JPT][hapmap]
rs10825217	0.89[CEU][hapmap]
rs10825218	0.95[CEU][hapmap];0.81[CHD][hapmap];0.98[GIH][hapmap];0.91[TSI][hapmap]
rs12573018	0.81[ASN][1000 genomes]
rs12765173	1.00[CEU][hapmap]
rs1911375	0.95[CEU][hapmap];0.81[MEX][hapmap]
rs1911390	1.00[CEU][hapmap];0.98[GIH][hapmap];0.83[MEX][hapmap];0.88[TSI][hapmap]
rs1911394	0.95[CEU][hapmap]
rs1911396	0.91[CEU][hapmap]
rs1911397	1.00[CEU][hapmap];0.98[GIH][hapmap];0.83[MEX][hapmap];0.90[TSI][hapmap]
rs2078459	1.00[CEU][hapmap]
rs2089400	0.91[CEU][hapmap]
rs2245467	0.95[CEU][hapmap]
rs2384372	0.95[CEU][hapmap];0.82[CHB][hapmap]
rs2610830	0.91[CEU][hapmap]
rs2610862	0.95[CEU][hapmap]
rs2610869	0.95[CEU][hapmap]
rs2610872	0.95[CEU][hapmap]
rs2660139	0.90[CEU][hapmap]
rs2660141	0.95[CEU][hapmap];0.81[MEX][hapmap]
rs2660161	0.95[CEU][hapmap]
rs2660195	0.84[TSI][hapmap]
rs3812658	1.00[CEU][hapmap];0.93[GIH][hapmap];0.83[MEX][hapmap];0.82[TSI][hapmap]
rs718310	0.91[CEU][hapmap]
rs7392916	0.90[JPT][hapmap]
rs7911734	0.95[CEU][hapmap];0.93[GIH][hapmap];0.83[MEX][hapmap];0.81[TSI][hapmap]
rs9645505	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949692	chr10:55502542-55893206	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv869303	chr10:55714219-55857931	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv8667	chr10:55803106-56022647	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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