Variant report

Variant	rs2673820
Chromosome Location	chr10:89793243-89793244
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs2248456	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2673813	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2673814	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2673815	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2673817	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2673818	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2673819	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2673821	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2673822	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2673826	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs760177	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89788800-89796800	Weak transcription	Primary T helper cells fromperipheralblood	blood
2	chr10:89788800-89797200	Weak transcription	Fetal Thymus	thymus
3	chr10:89788800-89801400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr10:89789200-89793400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr10:89789200-89797600	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr10:89790600-89793400	Weak transcription	Fetal Intestine Large	intestine
7	chr10:89791000-89793400	Weak transcription	Fetal Intestine Small	intestine
8	chr10:89791000-89795200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr10:89791000-89795400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr10:89791000-89796400	Weak transcription	Primary hematopoietic stem cells	blood
11	chr10:89791800-89793800	Enhancers	NHDF-Ad	bronchial
12	chr10:89792000-89793400	Enhancers	Osteobl	bone
13	chr10:89792000-89793800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr10:89792200-89794200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr10:89792400-89793400	Weak transcription	HUES64 Cell Line	embryonic stem cell
16	chr10:89792800-89797400	Weak transcription	Fetal Stomach	stomach
17	chr10:89792800-89797600	Weak transcription	NH-A	brain
18	chr10:89793000-89793600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr10:89793000-89797400	Weak transcription	NHLF	lung
20	chr10:89793000-89799000	Weak transcription	A549	lung
21	chr10:89793200-89793800	Enhancers	Primary monocytes fromperipheralblood	blood
22	chr10:89793200-89797600	Weak transcription	Muscle Satellite Cultured Cells	--
23	chr10:89793200-89799200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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