Variant report

Variant	rs2673826
Chromosome Location	chr10:89807131-89807132
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs2248456	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2673813	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2673814	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2673815	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2673817	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2673818	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2673819	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2673820	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2673821	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2673822	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs760177	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89801600-89808400	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr10:89802600-89822200	Weak transcription	Aorta	Aorta
3	chr10:89803400-89822000	Weak transcription	Psoas Muscle	Psoas
4	chr10:89803600-89807800	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr10:89804600-89807200	Enhancers	Fetal Thymus	thymus
6	chr10:89805000-89807200	Enhancers	Fetal Muscle Leg	muscle
7	chr10:89805000-89808400	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr10:89806400-89807200	Weak transcription	Brain Hippocampus Middle	brain
9	chr10:89806400-89810800	Enhancers	Dnd41	blood
10	chr10:89806600-89807200	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr10:89806600-89807600	Weak transcription	Primary neutrophils fromperipheralblood	blood
12	chr10:89806600-89807800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr10:89806800-89808400	Enhancers	Monocytes-CD14+_RO01746	blood
14	chr10:89806800-89809400	Weak transcription	Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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