Variant report

Variant	rs2723157
Chromosome Location	chr2:113630029-113630030
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10192907	0.96[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1143630	1.00[CEU][hapmap];0.83[YRI][hapmap];0.85[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs11884436	0.98[EUR][1000 genomes]
rs17042498	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs17042509	0.92[EUR][1000 genomes]
rs17042517	0.98[EUR][1000 genomes]
rs2708915	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2708930	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2723158	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4369864	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4439960	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4547538	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4619621	0.93[AMR][1000 genomes]
rs4849126	1.00[CEU][hapmap];0.89[YRI][hapmap];0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4849127	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs56100202	0.89[EUR][1000 genomes]
rs57799055	0.98[EUR][1000 genomes]
rs6542102	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:113626200-113634000	Weak transcription	Placenta	Placenta
2	chr2:113629000-113634000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr2:113629200-113632800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr2:113629200-113632800	Weak transcription	NHEK	skin
5	chr2:113629200-113633000	Weak transcription	HMEC	breast
6	chr2:113629200-113637800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr2:113629200-113643200	Weak transcription	Right Atrium	heart
8	chr2:113629400-113630200	Weak transcription	Primary monocytes fromperipheralblood	blood
9	chr2:113629800-113632800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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